Building on rosemary
(from freebsd)
2025-08-23 20:22.10 ---> using "77d5fe31836124b4684d554707425c4fde23f9ef3df0a804431a47419573778d" from cache
/: (user (uid 1000) (gid 1000))
/: (env OPAMPRECISETRACKING 1)
/: (env OPAMUTF8 never)
/: (env OPAMEXTERNALSOLVER builtin-0install)
/: (env OPAMCRITERIA +removed)
/: (env CI true)
/: (env OPAM_HEALTH_CHECK_CI true)
/: (run (shell "sudo ln -f /usr/local/bin/opam-dev /usr/local/bin/opam"))
2025-08-23 20:22.10 ---> using "7afea9128a2830beedf345f0b46af5484579ebada7710165f445c6c5b18563a9" from cache
/: (run (network host)
(shell "rm -rf ~/opam-repository && git clone -q 'https://github.com/ocaml/opam-repository' ~/opam-repository && git -C ~/opam-repository checkout -q 0978bfceb7ae2705887d6bd1b65779f77e52a183"))
2025-08-23 20:22.10 ---> using "31524c560f106c12940b60ac318a4d9768edf3ea35ee4e97727f47a3d78e237f" from cache
/: (run (shell "rm -rf ~/.opam && opam init -ya --bare ~/opam-repository"))
No configuration file found, using built-in defaults.
Checking for available remotes: rsync and local, git.
- you won't be able to use mercurial repositories unless you install the hg command on your system.
- you won't be able to use darcs repositories unless you install the darcs command on your system.
<><> Fetching repository information ><><><><><><><><><><><><><><><><><><><><><>
[default] Initialised
User configuration:
~/.profile is already up-to-date.
[NOTE] Make sure that ~/.profile is well sourced in your ~/.bashrc.
2025-08-23 20:22.11 ---> using "6b10c2b218ba1c88ea1a4506371091b4212462a3198f8f55b8320640a71e2608" from cache
/: (run (cache (opam-archives (target /home/opam/.opam/download-cache)))
(network host)
(shell "opam switch create --repositories=default '5.3.0' 'ocaml-base-compiler.5.3.0'"))
<><> Installing new switch packages <><><><><><><><><><><><><><><><><><><><><><>
Switch invariant: ["ocaml-base-compiler" {= "5.3.0"}]
<><> Processing actions <><><><><><><><><><><><><><><><><><><><><><><><><><><><>
-> retrieved ocaml-config.3 (cached)
-> installed base-bigarray.base
-> installed base-threads.base
-> installed base-unix.base
-> installed ocaml-options-vanilla.1
-> retrieved ocaml-compiler.5.3.0 (cached)
-> installed ocaml-compiler.5.3.0
-> installed ocaml-base-compiler.5.3.0
-> installed ocaml-config.3
-> installed ocaml.5.3.0
-> installed base-domains.base
-> installed base-effects.base
-> installed base-nnp.base
Done.
# To update the current shell environment, run: eval $(opam env --switch=5.3.0)
2025-08-23 20:22.11 ---> using "6577fe0975f13ce4884a6b9d633dee9c229717336cbac89d6416b452bdc04e2e" from cache
/: (run (network host)
(shell "opam update --depexts"))
[WARNING] Unknown update command for bsd, skipping system update
2025-08-23 20:22.12 ---> using "e35184fc5458ebfdb75d7512f09299148235d829f9b66348df20ee4a01859a6d" from cache
/: (run (cache (opam-archives (target /home/opam/.opam/download-cache)))
(network host)
(shell "opam remove -y orf.1.0.1\
\nopam install -vy orf.1.0.1\
\nres=$?\
\nif [ $res = 31 ]; then\
\n if opam show -f x-ci-accept-failures: orf.1.0.1 | grep -q 'freebsd'; then\
\n echo \"This package failed and has been disabled for CI using the 'x-ci-accept-failures' field.\"\
\n exit 69\
\n fi\
\nfi \
\n\
\n\
\nexit $res"))
[NOTE] orf.1.0.1 is not installed.
Nothing to do.
The following actions will be performed:
=== install 32 packages
- install base-bytes base [required by dokeysto]
- install batteries 3.9.0 [required by orf]
- install bst 7.1.0 [required by molenc]
- install camlp-streams 5.0.1 [required by batteries]
- install conf-autoconf 0.2 [required by cpu]
- install conf-graphviz 0.1 [required by molenc]
- install conf-python-3 9.0.0 [required by molenc]
- install conf-rdkit 1 [required by molenc]
- install cpm 12.2.0 [required by orf]
- install cpu 2.0.0 [required by parany]
- install csexp 1.5.2 [required by dune-configurator]
- install dokeysto 4.0.1 [required by molenc]
- install dolog 6.0.0 [required by orf]
- install dune 3.20.0 [required by orf]
- install dune-configurator 3.20.0 [required by extunix]
- install extunix 0.4.4 [required by dokeysto]
- install line_oriented 1.3.0 [required by orf]
- install minicli 5.0.2 [required by orf]
- install molenc 17.0.1 [required by orf]
- install num 1.6 [required by batteries]
- install ocaml-compiler-libs v0.17.0 [required by ppxlib]
- install ocamlfind 1.9.8 [required by batteries]
- install ocamlgraph 2.2.0 [required by molenc]
- install orf 1.0.1
- install parany 14.0.1 [required by orf]
- install ppx_derivers 1.2.1 [required by ppxlib]
- install ppxlib 0.37.0~5.4preview [required by extunix]
- install pyml 20250807 [required by molenc]
- install sexplib0 v0.17.0 [required by ppxlib]
- install stdcompat 21.0 [required by pyml]
- install stdlib-shims 0.3.0 [required by ppxlib]
- install vector3 1.0.0 [required by molenc]
The following system packages will first need to be installed:
autoconf graphics/graphviz python3 rdkit
<><> Handling external dependencies <><><><><><><><><><><><><><><><><><><><><><>
opam believes some required external dependencies are missing. opam can:
> 1. Run pkg to install them (may need root/sudo access)
2. Display the recommended pkg command and wait while you run it manually (e.g. in another terminal)
3. Continue anyway, and, upon success, permanently register that this external dependency is present, but not detectable
4. Abort the installation
[1/2/3/4] 1
+ /usr/local/bin/sudo "pkg" "install" "-y" "autoconf" "graphics/graphviz" "python3" "rdkit"
- Updating FreeBSD repository catalogue...
- [rosemary] Fetching data.pkg: ......
- .... done
- Processing entries:
- .
- .
- ..
- ..
- .
- ..
- . done
- FreeBSD repository update completed. 35660 packages processed.
- All repositories are up to date.
- New version of pkg detected; it needs to be installed first.
- The following 1 package(s) will be affected (of 0 checked):
-
- Installed packages to be UPGRADED:
- pkg: 2.2.1 -> 2.2.2
-
- Number of packages to be upgraded: 1
-
- 12 MiB to be downloaded.
- [rosemary] [1/1] Fetching pkg-2.2.2.pkg: ......
- .... done
- Checking integrity... done (0 conflicting)
- [rosemary] [1/1] Upgrading pkg from 2.2.1 to 2.2.2...
- [rosemary] [1/1] Extracting pkg-2.2.2: .......... done
- Updating FreeBSD repository catalogue...
- FreeBSD repository is up to date.
- All repositories are up to date.
- The following 108 package(s) will be affected (of 0 checked):
-
- New packages to be INSTALLED:
- adobe-cmaps: 20051217_4
- aom: 3.12.1
- autoconf: 2.72
- autoconf-switch: 20220527
- binutils: 2.44,1
- boost-libs: 1.88.0_1
- cairo: 1.18.2,3
- coordgenlibs: 3.0.2
- dav1d: 1.5.1_1
- fontconfig: 2.15.0_3,1
- freetype2: 2.13.3
- fribidi: 1.0.16
- gcc13: 13.3.0_3
- gdk-pixbuf2: 2.42.12_2
- giflib: 5.2.2
- glib: 2.84.1_2,2
- gmp: 6.3.0
- graphite2: 1.3.14
- graphviz: 12.2.1_2
- harfbuzz: 10.3.0
- icu: 76.1,1
- jbigkit: 2.1_3
- jpeg-turbo: 3.1.1
- lcms2: 2.17
- lerc: 4.0.0
- libICE: 1.1.2,1
- libSM: 1.2.6,1
- libX11: 1.8.12,1
- libXScrnSaver: 1.2.4_1
- libXau: 1.0.12
- libXaw: 1.0.16,2
- libXdmcp: 1.1.5
- libXext: 1.3.6,1
- libXft: 2.3.8
- libXmu: 1.1.4,1
- libXpm: 3.5.17_1
- libXrender: 0.9.12
- libXt: 1.3.0,1
- libavif: 1.3.0_1
- libdatrie: 0.2.13_2
- libdeflate: 1.24
- libfontenc: 1.1.8
- libgcrypt: 1.11.2
- libgd: 2.3.3_13,1
- libgpg-error: 1.55
- libimagequant: 4.3.4_3
- libinotify: 20240724_1
- libltdl: 2.5.4
- libraqm: 0.10.2
- libthai: 0.1.29_1
- libxcb: 1.17.0
- libxml2: 2.14.5
- libxslt: 1.1.43_1
- libyuv: 0.0.1789_2
- lzo2: 2.10_1
- m4: 1.4.19_1,1
- maeparser: 1.3.3
- mkfontscale: 1.2.3
- mpc: 1.3.1_1
- mpfr: 4.2.2,1
- openblas: 0.3.30,2
- openjpeg: 2.5.3
- pango: 1.56.1
- pixman: 0.46.2
- png: 1.6.49
- py311-appdirs: 1.4.4_1
- py311-boost-libs: 1.88.0
- py311-brotli: 1.1.0
- py311-certifi: 2025.6.15
- py311-contourpy: 1.3.2
- py311-cycler: 0.12.1
- py311-fonttools: 4.58.4
- py311-fs2: 2.4.16_1
- py311-importlib-resources: 6.5.2
- py311-kiwisolver: 1.4.8,1
- py311-lxml: 4.9.3_2
- py311-matplotlib: 3.8.0_1
- py311-numpy: 1.26.4_6,1
- py311-olefile: 0.46_1
- py311-packaging: 25.0
- py311-pillow: 11.2.1
- py311-pluggy: 1.6.0
- py311-pyparsing: 3.2.3
- py311-python-dateutil: 2.9.0
- py311-pytz: 2025.2_1,1
- py311-reportlab: 4.4.2
- py311-six: 1.17.0
- py311-tkinter: 3.11.13_11
- py311-tornado: 6.5
- py311-unicodedata2: 16.0.0
- py311-zopfli: 0.2.3
- python3: 3_4
- qhull: 8.0.2_3,1
- rdkit: 2025.03.1_1
- shared-mime-info: 2.4_2
- suitesparse-amd: 3.3.3
- suitesparse-camd: 3.3.4
- suitesparse-ccolamd: 3.3.4
- suitesparse-cholmod: 5.3.3
- suitesparse-colamd: 3.3.4
- suitesparse-config: 7.10.3
- suitesparse-umfpack: 6.3.5_1
- tcl86: 8.6.16_2
- tiff: 4.7.0
- tk86: 8.6.16
- vmaf: 3.0.0
- webp: 1.5.0
- xorgproto: 2024.1
-
- Number of packages to be installed: 108
-
- The process will require 1 GiB more space.
- 253 MiB to be downloaded.
- [rosemary] [1/108] Fetching png-1.6.49.pkg: ...
- ....... done
- [rosemary] [2/108] Fetching qhull-8.0.2_3,1.pkg: ......
- .... done
- [rosemary] [3/108] Fetching libxcb-1.17.0.pkg: .......
- ... done
- [rosemary] [4/108] Fetching libdatrie-0.2.13_2.pkg: ... done
- [rosemary] [5/108] Fetching libraqm-0.10.2.pkg: .. done
- [rosemary] [6/108] Fetching freetype2-2.13.3.pkg: .......
- ... done
- [rosemary] [7/108] Fetching jpeg-turbo-3.1.1.pkg: .......... done
- [rosemary] [8/108] Fetching libXt-1.3.0,1.pkg: .......... done
- [rosemary] [9/108] Fetching suitesparse-camd-3.3.4.pkg: ..
- ........ done
- [rosemary] [10/108] Fetching py311-pluggy-1.6.0.pkg: ... done
- [rosemary] [11/108] Fetching libxslt-1.1.43_1.pkg: .......... done
- [rosemary] [12/108] Fetching boost-libs-1.88.0_1.pkg:
- .
- .
- ...
- ..
- ... done
- [rosemary] [13/108] Fetching py311-numpy-1.26.4_6,1.pkg:
- .
- ..
- ..
- ..
- .
- .
- . done
- [rosemary] [14/108] Fetching py311-python-dateutil-2.9.0.pkg: ........
- .. done
- [rosemary] [15/108] Fetching lzo2-2.10_1.pkg: ........ done
- [rosemary] [16/108] Fetching py311-six-1.17.0.pkg: .. done
- [rosemary] [17/108] Fetching lcms2-2.17.pkg: ...
- ....... done
- [rosemary] [18/108] Fetching py311-appdirs-1.4.4_1.pkg: . done
- [rosemary] [19/108] Fetching libXaw-1.0.16,2.pkg: .....
- ..... done
- [rosemary] [20/108] Fetching libthai-0.1.29_1.pkg: .......... done
- [rosemary] [21/108] Fetching suitesparse-cholmod-5.3.3.pkg: ....
- ...... done
- [rosemary] [22/108] Fetching python3-3_4.pkg: . done
- [rosemary] [23/108] Fetching mkfontscale-1.2.3.pkg: . done
- [rosemary] [24/108] Fetching libdeflate-1.24.pkg: ...... done
- [rosemary] [25/108] Fetching fribidi-1.0.16.pkg: ...... done
- [rosemary] [26/108] Fetching vmaf-3.0.0.pkg: .......... done
- [rosemary] [27/108] Fetching openjpeg-2.5.3.pkg: .......... done
- [rosemary] [28/108] Fetching maeparser-1.3.3.pkg: ...... done
- [rosemary] [29/108] Fetching rdkit-2025.03.1_1.pkg:
- .
- .
- .
- .
- ..
- .
- .
- .. done
- [rosemary] [30/108] Fetching aom-3.12.1.pkg: .
- .......
- .. done
- [rosemary] [31/108] Fetching libxml2-2.14.5.pkg: ......
- .... done
- [rosemary] [32/108] Fetching py311-fonttools-4.58.4.pkg: ..
- .....
- ... done
- [rosemary] [33/108] Fetching libgd-2.3.3_13,1.pkg: .......... done
- [rosemary] [34/108] Fetching py311-cycler-0.12.1.pkg: . done
- [rosemary] [35/108] Fetching gdk-pixbuf2-2.42.12_2.pkg:
- .......
- ... done
- [rosemary] [36/108] Fetching icu-76.1,1.pkg:
- .
- ..
- ..
- .
- .
- .
- .. done
- [rosemary] [37/108] Fetching py311-unicodedata2-16.0.0.pkg: .......... done
- [rosemary] [38/108] Fetching py311-packaging-25.0.pkg: ........ done
- [rosemary] [39/108] Fetching libXScrnSaver-1.2.4_1.pkg: . done
- [rosemary] [40/108] Fetching libimagequant-4.3.4_3.pkg: .......... done
- [rosemary] [41/108] Fetching libX11-1.8.12,1.pkg: ..
- ........ done
- [rosemary] [42/108] Fetching giflib-5.2.2.pkg: .......
- ... done
- [rosemary] [43/108] Fetching libXrender-0.9.12.pkg: ... done
- [rosemary] [44/108] Fetching suitesparse-umfpack-6.3.5_1.pkg: .....
- ..... done
- [rosemary] [45/108] Fetching xorgproto-2024.1.pkg: .......... done
- [rosemary] [46/108] Fetching suitesparse-ccolamd-3.3.4.pkg: ... done
- [rosemary] [47/108] Fetching py311-pytz-2025.2_1,1.pkg: .......... done
- [rosemary] [48/108] Fetching libXft-2.3.8.pkg: ..... done
- [rosemary] [49/108] Fetching webp-1.5.0.pkg: .
- ......... done
- [rosemary] [50/108] Fetching cairo-1.18.2,3.pkg: .......
- ... done
- [rosemary] [51/108] Fetching graphite2-1.3.14.pkg: ....... done
- [rosemary] [52/108] Fetching shared-mime-info-2.4_2.pkg: .......... done
- [rosemary] [53/108] Fetching coordgenlibs-3.0.2.pkg: .....
- ..... done
- [rosemary] [54/108] Fetching harfbuzz-10.3.0.pkg: .......... done
- [rosemary] [55/108] Fetching py311-fs2-2.4.16_1.pkg: .......... done
- [rosemary] [56/108] Fetching py311-tornado-6.5.pkg: .......... done
- [rosemary] [57/108] Fetching libinotify-20240724_1.pkg: .. done
- [rosemary] [58/108] Fetching suitesparse-amd-3.3.3.pkg: .......... done
- [rosemary] [59/108] Fetching py311-brotli-1.1.0.pkg: . done
- [rosemary] [60/108] Fetching py311-reportlab-4.4.2.pkg: ...
- ......
- . done
- [rosemary] [61/108] Fetching graphviz-12.2.1_2.pkg: ..
- ......
- .. done
- [rosemary] [62/108] Fetching py311-certifi-2025.6.15.pkg: .......... done
- [rosemary] [63/108] Fetching adobe-cmaps-20051217_4.pkg: ..
- ........ done
- [rosemary] [64/108] Fetching py311-matplotlib-3.8.0_1.pkg: .
- ..
- ...
- ...
- . done
- [rosemary] [65/108] Fetching libfontenc-1.1.8.pkg: . done
- [rosemary] [66/108] Fetching libgcrypt-1.11.2.pkg: .....
- ..... done
- [rosemary] [67/108] Fetching libavif-1.3.0_1.pkg: .......... done
- [rosemary] [68/108] Fetching py311-tkinter-3.11.13_11.pkg: .. done
- [rosemary] [69/108] Fetching py311-lxml-4.9.3_2.pkg: .
- ......... done
- [rosemary] [70/108] Fetching tk86-8.6.16.pkg: ......
- .... done
- [rosemary] [71/108] Fetching pango-1.56.1.pkg: .
- ......
- ... done
- [rosemary] [72/108] Fetching libgpg-error-1.55.pkg: .......... done
- [rosemary] [73/108] Fetching gmp-6.3.0.pkg: ..
- ........ done
- [rosemary] [74/108] Fetching py311-kiwisolver-1.4.8,1.pkg: .... done
- [rosemary] [75/108] Fetching mpfr-4.2.2,1.pkg: .......... done
- [rosemary] [76/108] Fetching suitesparse-config-7.10.3.pkg: ... done
- [rosemary] [77/108] Fetching py311-contourpy-1.3.2.pkg: ...
- ....... done
- [rosemary] [78/108] Fetching libXext-1.3.6,1.pkg: ....... done
- [rosemary] [79/108] Fetching suitesparse-colamd-3.3.4.pkg: .. done
- [rosemary] [80/108] Fetching libXau-1.0.12.pkg: . done
- [rosemary] [81/108] Fetching libICE-1.1.2,1.pkg: ....... done
- [rosemary] [82/108] Fetching libXmu-1.1.4,1.pkg: ....... done
- [rosemary] [83/108] Fetching py311-pyparsing-3.2.3.pkg: .......... done
- [rosemary] [84/108] Fetching py311-zopfli-0.2.3.pkg: .
- ........ done
- [rosemary] [85/108] Fetching libltdl-2.5.4.pkg: ... done
- [rosemary] [86/108] Fetching libyuv-0.0.1789_2.pkg: .......... done
- [rosemary] [87/108] Fetching fontconfig-2.15.0_3,1.pkg: .
- ......... done
- [rosemary] [88/108] Fetching pixman-0.46.2.pkg: .......... done
- [rosemary] [89/108] Fetching py311-olefile-0.46_1.pkg: .... done
- [rosemary] [90/108] Fetching dav1d-1.5.1_1.pkg: .
- ......... done
- [rosemary] [91/108] Fetching m4-1.4.19_1,1.pkg: .......... done
- [rosemary] [92/108] Fetching mpc-1.3.1_1.pkg: ...
- .... done
- [rosemary] [93/108] Fetching libSM-1.2.6,1.pkg: . done
- [rosemary] [94/108] Fetching glib-2.84.1_2,2.pkg: .
- ..
- ..
- ...
- .. done
- [rosemary] [95/108] Fetching py311-pillow-11.2.1.pkg: ......
- .... done
- [rosemary] [96/108] Fetching py311-importlib-resources-6.5.2.pkg: ..... done
- [rosemary] [97/108] Fetching jbigkit-2.1_3.pkg: ..... done
- [rosemary] [98/108] Fetching gcc13-13.3.0_3.pkg:
- .
- .
- .
- .
- .
- .
- .
- .
- .
- . done
- [rosemary] [99/108] Fetching py311-boost-libs-1.88.0.pkg: ....
- ...... done
- [rosemary] [100/108] Fetching libXpm-3.5.17_1.pkg: ...... done
- [rosemary] [101/108] Fetching binutils-2.44,1.pkg:
- ..
- ..
- ....
- .. done
- [rosemary] [102/108] Fetching libXdmcp-1.1.5.pkg: . done
- [rosemary] [103/108] Fetching tiff-4.7.0.pkg: .
- ......... done
- [rosemary] [104/108] Fetching tcl86-8.6.16_2.pkg: .
- ......... done
- [rosemary] [105/108] Fetching autoconf-switch-20220527.pkg: . done
- [rosemary] [106/108] Fetching openblas-0.3.30,2.pkg: .
- .
- ..
- ...
- ... done
- [rosemary] [107/108] Fetching lerc-4.0.0.pkg: .......... done
- [rosemary] [108/108] Fetching autoconf-2.72.pkg: .......... done
- Checking integrity...
- done (0 conflicting)
- [rosemary] [1/108] Installing autoconf-switch-20220527...
- [rosemary] [1/108] Extracting autoconf-switch-20220527: .......... done
- [rosemary] [2/108] Installing binutils-2.44,1...
- [rosemary] [2/108] Extracting binutils-2.44,1:
- .......... done
- [rosemary] [3/108] Installing dav1d-1.5.1_1...
- [rosemary] [3/108] Extracting dav1d-1.5.1_1: .......... done
- [rosemary] [4/108] Installing fribidi-1.0.16...
- [rosemary] [4/108] Extracting fribidi-1.0.16: .......... done
- [rosemary] [5/108] Installing giflib-5.2.2...
- [rosemary] [5/108] Extracting giflib-5.2.2: .......... done
- [rosemary] [6/108] Installing gmp-6.3.0...
- [rosemary] [6/108] Extracting gmp-6.3.0: .......... done
- [rosemary] [7/108] Installing graphite2-1.3.14...
- [rosemary] [7/108] Extracting graphite2-1.3.14: .......... done
- [rosemary] [8/108] Installing icu-76.1,1...
- [rosemary] [8/108] Extracting icu-76.1,1: .......... done
- [rosemary] [9/108] Installing boost-libs-1.88.0_1...
- [rosemary] [9/108] Extracting boost-libs-1.88.0_1: ....
- ...... done
- [rosemary] [10/108] Installing jbigkit-2.1_3...
- [rosemary] [10/108] Extracting jbigkit-2.1_3: .......... done
- [rosemary] [11/108] Installing jpeg-turbo-3.1.1...
- [rosemary] [11/108] Extracting jpeg-turbo-3.1.1: .......... done
- [rosemary] [12/108] Installing lerc-4.0.0...
- [rosemary] [12/108] Extracting lerc-4.0.0: ........ done
- [rosemary] [13/108] Installing libICE-1.1.2,1...
- [rosemary] [13/108] Extracting libICE-1.1.2,1: .......... done
- [rosemary] [14/108] Installing libSM-1.2.6,1...
- [rosemary] [14/108] Extracting libSM-1.2.6,1: .......... done
- [rosemary] [15/108] Installing libXau-1.0.12...
- [rosemary] [15/108] Extracting libXau-1.0.12: .......... done
- [rosemary] [16/108] Installing libdatrie-0.2.13_2...
- [rosemary] [16/108] Extracting libdatrie-0.2.13_2: .......... done
- [rosemary] [17/108] Installing libdeflate-1.24...
- [rosemary] [17/108] Extracting libdeflate-1.24: .......... done
- [rosemary] [18/108] Installing libfontenc-1.1.8...
- [rosemary] [18/108] Extracting libfontenc-1.1.8: ......... done
- [rosemary] [19/108] Installing libgpg-error-1.55...
- [rosemary] [19/108] Extracting libgpg-error-1.55: .......... done
- [rosemary] [20/108] Installing libgcrypt-1.11.2...
- [rosemary] [20/108] Extracting libgcrypt-1.11.2: .......... done
- [rosemary] [21/108] Installing libimagequant-4.3.4_3...
- [rosemary] [21/108] Extracting libimagequant-4.3.4_3: ......... done
- [rosemary] [22/108] Installing libinotify-20240724_1...
- [rosemary] [22/108] Extracting libinotify-20240724_1: .......... done
- [rosemary] [23/108] Installing libltdl-2.5.4...
- [rosemary] [23/108] Extracting libltdl-2.5.4: .......... done
- [rosemary] [24/108] Installing libthai-0.1.29_1...
- [rosemary] [24/108] Extracting libthai-0.1.29_1: .......... done
- [rosemary] [25/108] Installing libxml2-2.14.5...
- [rosemary] [25/108] Extracting libxml2-2.14.5: .......... done
- [rosemary] [26/108] Installing libxslt-1.1.43_1...
- [rosemary] [26/108] Extracting libxslt-1.1.43_1: .......... done
- [rosemary] [27/108] Installing libyuv-0.0.1789_2...
- [rosemary] [27/108] Extracting libyuv-0.0.1789_2: .......... done
- [rosemary] [28/108] Installing lzo2-2.10_1...
- [rosemary] [28/108] Extracting lzo2-2.10_1: .......... done
- [rosemary] [29/108] Installing m4-1.4.19_1,1...
- [rosemary] [29/108] Extracting m4-1.4.19_1,1: .......... done
- [rosemary] [30/108] Installing autoconf-2.72...
- [rosemary] [30/108] Extracting autoconf-2.72: .......... done
- [rosemary] [31/108] Installing maeparser-1.3.3...
- [rosemary] [31/108] Extracting maeparser-1.3.3: .......... done
- [rosemary] [32/108] Installing coordgenlibs-3.0.2...
- [rosemary] [32/108] Extracting coordgenlibs-3.0.2: .......... done
- [rosemary] [33/108] Installing mpfr-4.2.2,1...
- [rosemary] [33/108] Extracting mpfr-4.2.2,1: .......... done
- [rosemary] [34/108] Installing mpc-1.3.1_1...
- [rosemary] [34/108] Extracting mpc-1.3.1_1: ......... done
- [rosemary] [35/108] Installing gcc13-13.3.0_3...
- [rosemary] [35/108] Extracting gcc13-13.3.0_3: .........
- . done
- [rosemary] [36/108] Installing openblas-0.3.30,2...
- [rosemary] [36/108] Extracting openblas-0.3.30,2: .......... done
- [rosemary] [37/108] Installing pixman-0.46.2...
- [rosemary] [37/108] Extracting pixman-0.46.2: ......... done
- [rosemary] [38/108] Installing png-1.6.49...
- [rosemary] [38/108] Extracting png-1.6.49: ........
- .. done
- [rosemary] [39/108] Installing freetype2-2.13.3...
- [rosemary] [39/108] Extracting freetype2-2.13.3: .......... done
- [rosemary] [40/108] Installing fontconfig-2.15.0_3,1...
- [rosemary] [40/108] Extracting fontconfig-2.15.0_3,1: .......... done
- [rosemary] [41/108] Installing mkfontscale-1.2.3...
- [rosemary] [41/108] Extracting mkfontscale-1.2.3: ....... done
- [rosemary] [42/108] Installing adobe-cmaps-20051217_4...
- [rosemary] [42/108] Extracting adobe-cmaps-20051217_4: .......... done
- [rosemary] [43/108] Installing py311-appdirs-1.4.4_1...
- [rosemary] [43/108] Extracting py311-appdirs-1.4.4_1: .......... done
- [rosemary] [44/108] Installing py311-boost-libs-1.88.0...
- [rosemary] [44/108] Extracting py311-boost-libs-1.88.0: .......... done
- [rosemary] [45/108] Installing py311-brotli-1.1.0...
- [rosemary] [45/108] Extracting py311-brotli-1.1.0: .......... done
- [rosemary] [46/108] Installing py311-certifi-2025.6.15...
- [rosemary] [46/108] Extracting py311-certifi-2025.6.15: .......... done
- [rosemary] [47/108] Installing py311-cycler-0.12.1...
- [rosemary] [47/108] Extracting py311-cycler-0.12.1: .......... done
- [rosemary] [48/108] Installing py311-importlib-resources-6.5.2...
- [rosemary] [48/108] Extracting py311-importlib-resources-6.5.2: .......... done
- [rosemary] [49/108] Installing py311-kiwisolver-1.4.8,1...
- [rosemary] [49/108] Extracting py311-kiwisolver-1.4.8,1: .......... done
- [rosemary] [50/108] Installing py311-lxml-4.9.3_2...
- [rosemary] [50/108] Extracting py311-lxml-4.9.3_2: .......... done
- [rosemary] [51/108] Installing py311-olefile-0.46_1...
- [rosemary] [51/108] Extracting py311-olefile-0.46_1: .......... done
- [rosemary] [52/108] Installing py311-packaging-25.0...
- [rosemary] [52/108] Extracting py311-packaging-25.0: .......... done
- [rosemary] [53/108] Installing glib-2.84.1_2,2...
- [rosemary] [53/108] Extracting glib-2.84.1_2,2: ........
- .. done
- [rosemary] [54/108] Installing harfbuzz-10.3.0...
- [rosemary] [54/108] Extracting harfbuzz-10.3.0: .......... done
- [rosemary] [55/108] Installing libraqm-0.10.2...
- [rosemary] [55/108] Extracting libraqm-0.10.2: .......... done
- [rosemary] [56/108] Installing py311-pluggy-1.6.0...
- [rosemary] [56/108] Extracting py311-pluggy-1.6.0: .......... done
- [rosemary] [57/108] Installing py311-pyparsing-3.2.3...
- [rosemary] [57/108] Extracting py311-pyparsing-3.2.3: .......... done
- [rosemary] [58/108] Installing py311-pytz-2025.2_1,1...
- [rosemary] [58/108] Extracting py311-pytz-2025.2_1,1: .......... done
- [rosemary] [59/108] Installing py311-six-1.17.0...
- [rosemary] [59/108] Extracting py311-six-1.17.0: .......... done
- [rosemary] [60/108] Installing py311-fs2-2.4.16_1...
- [rosemary] [60/108] Extracting py311-fs2-2.4.16_1: .......... done
- [rosemary] [61/108] Installing py311-python-dateutil-2.9.0...
- [rosemary] [61/108] Extracting py311-python-dateutil-2.9.0: .......... done
- [rosemary] [62/108] Installing py311-tornado-6.5...
- [rosemary] [62/108] Extracting py311-tornado-6.5: .......... done
- [rosemary] [63/108] Installing py311-unicodedata2-16.0.0...
- [rosemary] [63/108] Extracting py311-unicodedata2-16.0.0: ......... done
- [rosemary] [64/108] Installing py311-zopfli-0.2.3...
- [rosemary] [64/108] Extracting py311-zopfli-0.2.3: .
- ......... done
- [rosemary] [65/108] Installing py311-fonttools-4.58.4...
- [rosemary] [65/108] Extracting py311-fonttools-4.58.4: .......... done
- [rosemary] [66/108] Installing python3-3_4...
- [rosemary] [66/108] Extracting python3-3_4: ....... done
- [rosemary] [67/108] Installing qhull-8.0.2_3,1...
- [rosemary] [67/108] Extracting qhull-8.0.2_3,1: .......... done
- [rosemary] [68/108] Installing shared-mime-info-2.4_2...
- [rosemary] [68/108] Extracting shared-mime-info-2.4_2: ......... done
- [rosemary] [69/108] Installing suitesparse-config-7.10.3...
- [rosemary] [69/108] Extracting suitesparse-config-7.10.3: .......... done
- [rosemary] [70/108] Installing suitesparse-amd-3.3.3...
- [rosemary] [70/108] Extracting suitesparse-amd-3.3.3: .......... done
- [rosemary] [71/108] Installing suitesparse-camd-3.3.4...
- [rosemary] [71/108] Extracting suitesparse-camd-3.3.4: .......... done
- [rosemary] [72/108] Installing suitesparse-ccolamd-3.3.4...
- [rosemary] [72/108] Extracting suitesparse-ccolamd-3.3.4: .......... done
- [rosemary] [73/108] Installing suitesparse-colamd-3.3.4...
- [rosemary] [73/108] Extracting suitesparse-colamd-3.3.4: .......... done
- [rosemary] [74/108] Installing suitesparse-cholmod-5.3.3...
- [rosemary] [74/108] Extracting suitesparse-cholmod-5.3.3: .......... done
- [rosemary] [75/108] Installing suitesparse-umfpack-6.3.5_1...
- [rosemary] [75/108] Extracting suitesparse-umfpack-6.3.5_1: .......... done
- [rosemary] [76/108] Installing py311-numpy-1.26.4_6,1...
- [rosemary] [76/108] Extracting py311-numpy-1.26.4_6,1: ......
- .... done
- [rosemary] [77/108] Installing py311-contourpy-1.3.2...
- [rosemary] [77/108] Extracting py311-contourpy-1.3.2: .......... done
- [rosemary] [78/108] Installing tcl86-8.6.16_2...
- [rosemary] [78/108] Extracting tcl86-8.6.16_2: .......... done
- [rosemary] [79/108] Installing tiff-4.7.0...
- [rosemary] [79/108] Extracting tiff-4.7.0: .......... done
- [rosemary] [80/108] Installing gdk-pixbuf2-2.42.12_2...
- [rosemary] [80/108] Extracting gdk-pixbuf2-2.42.12_2: .......... done
- [rosemary] [81/108] Installing lcms2-2.17...
- [rosemary] [81/108] Extracting lcms2-2.17: .......... done
- [rosemary] [82/108] Installing openjpeg-2.5.3...
- [rosemary] [82/108] Extracting openjpeg-2.5.3: .......... done
- [rosemary] [83/108] Installing vmaf-3.0.0...
- [rosemary] [83/108] Extracting vmaf-3.0.0: .......... done
- [rosemary] [84/108] Installing aom-3.12.1...
- [rosemary] [84/108] Extracting aom-3.12.1: .......... done
- [rosemary] [85/108] Installing libavif-1.3.0_1...
- [rosemary] [85/108] Extracting libavif-1.3.0_1:
- .......... done
- [rosemary] [86/108] Installing webp-1.5.0...
- [rosemary] [86/108] Extracting webp-1.5.0: .......... done
- [rosemary] [87/108] Installing libgd-2.3.3_13,1...
- [rosemary] [87/108] Extracting libgd-2.3.3_13,1: .......... done
- [rosemary] [88/108] Installing xorgproto-2024.1...
- [rosemary] [88/108] Extracting xorgproto-2024.1: .......... done
- [rosemary] [89/108] Installing libXdmcp-1.1.5...
- [rosemary] [89/108] Extracting libXdmcp-1.1.5: ......... done
- [rosemary] [90/108] Installing libxcb-1.17.0...
- [rosemary] [90/108] Extracting libxcb-1.17.0: .......... done
- [rosemary] [91/108] Installing libX11-1.8.12,1...
- [rosemary] [91/108] Extracting libX11-1.8.12,1:
- .......... done
- [rosemary] [92/108] Installing libXext-1.3.6,1...
- [rosemary] [92/108] Extracting libXext-1.3.6,1: .......... done
- [rosemary] [93/108] Installing libXScrnSaver-1.2.4_1...
- [rosemary] [93/108] Extracting libXScrnSaver-1.2.4_1: .......... done
- [rosemary] [94/108] Installing libXrender-0.9.12...
- [rosemary] [94/108] Extracting libXrender-0.9.12: .......... done
- [rosemary] [95/108] Installing cairo-1.18.2,3...
- [rosemary] [95/108] Extracting cairo-1.18.2,3: .......... done
- [rosemary] [96/108] Installing libXft-2.3.8...
- [rosemary] [96/108] Extracting libXft-2.3.8: .......... done
- [rosemary] [97/108] Installing libXt-1.3.0,1...
- [rosemary] [97/108] Extracting libXt-1.3.0,1: .......... done
- [rosemary] [98/108] Installing libXmu-1.1.4,1...
- [rosemary] [98/108] Extracting libXmu-1.1.4,1: .......... done
- [rosemary] [99/108] Installing libXpm-3.5.17_1...
- [rosemary] [99/108] Extracting libXpm-3.5.17_1: .......... done
- [rosemary] [100/108] Installing libXaw-1.0.16,2...
- [rosemary] [100/108] Extracting libXaw-1.0.16,2: .......... done
- [rosemary] [101/108] Installing pango-1.56.1...
- [rosemary] [101/108] Extracting pango-1.56.1: .......... done
- [rosemary] [102/108] Installing graphviz-12.2.1_2...
- [rosemary] [102/108] Extracting graphviz-12.2.1_2: .......... done
- [rosemary] [103/108] Installing tk86-8.6.16...
- [rosemary] [103/108] Extracting tk86-8.6.16: .......... done
- [rosemary] [104/108] Installing py311-tkinter-3.11.13_11...
- [rosemary] [104/108] Extracting py311-tkinter-3.11.13_11: ......... done
- [rosemary] [105/108] Installing py311-pillow-11.2.1...
- [rosemary] [105/108] Extracting py311-pillow-11.2.1: .......... done
- [rosemary] [106/108] Installing py311-matplotlib-3.8.0_1...
- [rosemary] [106/108] Extracting py311-matplotlib-3.8.0_1:
- .......... done
- [rosemary] [107/108] Installing py311-reportlab-4.4.2...
- [rosemary] [107/108] Extracting py311-reportlab-4.4.2: .......... done
- [rosemary] [108/108] Installing rdkit-2025.03.1_1...
- [rosemary] [108/108] Extracting rdkit-2025.03.1_1: .......... done
- ==> Running trigger: glib-schemas.ucl
- Compiling glib schemas
- No schema files found: doing nothing.
- ==> Running trigger: shared-mime-info.ucl
- Building the Shared MIME-Info database cache
- ==> Running trigger: fontconfig.ucl
- Running fc-cache to build fontconfig cache...
- ==> Running trigger: gdk-pixbuf-query-loaders.ucl
- Generating gdk-pixbuf modules cache
- ==> Running trigger: gio-modules.ucl
- Generating GIO modules cache
- =====
- Message from boost-libs-1.88.0_1:
-
- --
- You have built the Boost library with thread support.
-
- Don't forget to add -pthread to your linker options when
- linking your code.
- =====
- Message from libimagequant-4.3.4_3:
-
- --
- ===> NOTICE:
-
- The libimagequant port currently does not have a maintainer. As a result, it is
- more likely to have unresolved issues, not be up-to-date, or even be removed in
- the future. To volunteer to maintain this port, please create an issue at:
-
- https://bugs.freebsd.org/bugzilla
-
- More information about port maintainership is available at:
-
- https://docs.freebsd.org/en/articles/contributing/#ports-contributing
- =====
- Message from libinotify-20240724_1:
-
- --
- You might want to consider increasing the kern.maxfiles tunable if you plan
- to use this library for applications that need to monitor activity of a lot
- of files.
- =====
- Message from gcc13-13.3.0_3:
-
- --
- To ensure binaries built with this toolchain find appropriate versions
- of the necessary run-time libraries, you may want to link using
-
- -Wl,-rpath=/usr/local/lib/gcc13
-
- For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens
- transparently.
- =====
- Message from freetype2-2.13.3:
-
- --
- The 2.7.x series now uses the new subpixel hinting mode (V40 port's option) as
- the default, emulating a modern version of ClearType. This change inevitably
- leads to different rendering results, and you might change port's options to
- adapt it to your taste (or use the new "FREETYPE_PROPERTIES" environment
- variable).
-
- The environment variable "FREETYPE_PROPERTIES" can be used to control the
- driver properties. Example:
-
- FREETYPE_PROPERTIES=truetype:interpreter-version=35 \
- cff:no-stem-darkening=1 \
- autofitter:warping=1
-
- This allows to select, say, the subpixel hinting mode at runtime for a given
- application.
-
- If LONG_PCF_NAMES port's option was enabled, the PCF family names may include
- the foundry and information whether they contain wide characters. For example,
- "Sony Fixed" or "Misc Fixed Wide", instead of "Fixed". This can be disabled at
- run time with using pcf:no-long-family-names property, if needed. Example:
-
- FREETYPE_PROPERTIES=pcf:no-long-family-names=1
-
- How to recreate fontconfig cache with using such environment variable,
- if needed:
- # env FREETYPE_PROPERTIES=pcf:no-long-family-names=1 fc-cache -fsv
-
- The controllable properties are listed in the section "Controlling FreeType
- Modules" in the reference's table of contents
- (/usr/local/share/doc/freetype2/reference/index.html, if documentation was installed).
- =====
- Message from py311-boost-libs-1.88.0:
-
- --
- You have built the Boost library with thread support.
-
- Don't forget to add -pthread to your linker options when
- linking your code.
<><> Processing actions <><><><><><><><><><><><><><><><><><><><><><><><><><><><>
Processing 2/95: [batteries.3.9.0: extract]
Processing 3/95: [batteries.3.9.0: extract] [bst.7.1.0: extract]
Processing 4/95: [batteries.3.9.0: extract] [bst.7.1.0: extract] [camlp-streams.5.0.1: extract]
-> retrieved camlp-streams.5.0.1 (cached)
Processing 4/95: [batteries.3.9.0: extract] [bst.7.1.0: extract]
Processing 5/95: [batteries.3.9.0: extract] [bst.7.1.0: extract]
Processing 6/95: [batteries.3.9.0: extract] [bst.7.1.0: extract]
-> retrieved conf-python-3.9.0.0 (cached)
Processing 7/95: [batteries.3.9.0: extract] [bst.7.1.0: extract]
Processing 8/95: [batteries.3.9.0: extract] [bst.7.1.0: extract] [conf-rdkit.1/test.cpp: dl]
Processing 9/95: [batteries.3.9.0: extract] [bst.7.1.0: extract] [conf-rdkit.1/test.cpp: dl] [conf-autoconf: autoconf]
Processing 10/95: [batteries.3.9.0: extract] [bst.7.1.0: extract] [conf-rdkit.1/test.cpp: dl] [conf-autoconf: autoconf] [conf-graphviz: dot]
Processing 11/95: [batteries.3.9.0: extract] [bst.7.1.0: extract] [conf-rdkit.1/test.cpp: dl] [conf-autoconf: autoconf] [conf-graphviz: dot] [conf-python-3: python3 test.py]
-> retrieved bst.7.1.0 (cached)
Processing 11/95: [batteries.3.9.0: extract] [conf-rdkit.1/test.cpp: dl] [conf-autoconf: autoconf] [conf-graphviz: dot] [conf-python-3: python3 test.py]
Processing 12/95: [batteries.3.9.0: extract] [conf-rdkit.1/test.cpp: dl] [cpm.12.2.0: extract] [conf-autoconf: autoconf] [conf-graphviz: dot] [conf-python-3: python3 test.py]
+ /usr/local/bin/dot "-V" (CWD=/home/opam/.opam/5.3.0/.opam-switch/build/conf-graphviz.0.1)
- dot - graphviz version 12.2.1 (20241206.2353)
-> compiled conf-graphviz.0.1
Processing 12/95: [batteries.3.9.0: extract] [conf-rdkit.1/test.cpp: dl] [cpm.12.2.0: extract] [conf-autoconf: autoconf] [conf-python-3: python3 test.py]
-> installed conf-graphviz.0.1
Processing 13/95: [batteries.3.9.0: extract] [conf-rdkit.1/test.cpp: dl] [cpm.12.2.0: extract] [conf-autoconf: autoconf] [conf-python-3: python3 test.py]
-> retrieved batteries.3.9.0 (cached)
Processing 13/95: [conf-rdkit.1/test.cpp: dl] [cpm.12.2.0: extract] [conf-autoconf: autoconf] [conf-python-3: python3 test.py]
Processing 14/95: [conf-rdkit.1/test.cpp: dl] [cpm.12.2.0: extract] [cpu.2.0.0: extract] [conf-autoconf: autoconf] [conf-python-3: python3 test.py]
-> retrieved cpm.12.2.0 (cached)
Processing 14/95: [conf-rdkit.1/test.cpp: dl] [cpu.2.0.0: extract] [conf-autoconf: autoconf] [conf-python-3: python3 test.py]
Processing 15/95: [conf-rdkit.1/test.cpp: dl] [cpu.2.0.0: extract] [csexp.1.5.2: extract] [conf-autoconf: autoconf] [conf-python-3: python3 test.py]
-> retrieved cpu.2.0.0 (cached)
Processing 15/95: [conf-rdkit.1/test.cpp: dl] [csexp.1.5.2: extract] [conf-autoconf: autoconf] [conf-python-3: python3 test.py]
Processing 16/95: [conf-rdkit.1/test.cpp: dl] [csexp.1.5.2: extract] [dokeysto.4.0.1: http] [conf-autoconf: autoconf] [conf-python-3: python3 test.py]
+ /usr/local/bin/python3 "test.py" (CWD=/home/opam/.opam/5.3.0/.opam-switch/build/conf-python-3.9.0.0)
- python-3 OK
-> compiled conf-python-3.9.0.0
Processing 16/95: [conf-rdkit.1/test.cpp: dl] [csexp.1.5.2: extract] [dokeysto.4.0.1: http] [conf-autoconf: autoconf]
-> installed conf-python-3.9.0.0
Processing 17/95: [conf-rdkit.1/test.cpp: dl] [csexp.1.5.2: extract] [dokeysto.4.0.1: http] [conf-autoconf: autoconf]
+ /usr/local/bin/autoconf "-V" (CWD=/home/opam/.opam/5.3.0/.opam-switch/build/conf-autoconf.0.2)
- autoconf (GNU Autoconf) 2.72
- Copyright (C) 2023 Free Software Foundation, Inc.
- License GPLv3+/Autoconf: GNU GPL version 3 or later
- <https://gnu.org/licenses/gpl.html>, <https://gnu.org/licenses/exceptions.html>
- This is free software: you are free to change and redistribute it.
- There is NO WARRANTY, to the extent permitted by law.
-
- Written by David J. MacKenzie and Akim Demaille.
-> compiled conf-autoconf.0.2
Processing 17/95: [conf-rdkit.1/test.cpp: dl] [csexp.1.5.2: extract] [dokeysto.4.0.1: http]
-> installed conf-autoconf.0.2
Processing 18/95: [conf-rdkit.1/test.cpp: dl] [csexp.1.5.2: extract] [dokeysto.4.0.1: http]
-> retrieved conf-rdkit.1 (https://raw.githubusercontent.com/ocaml/opam-source-archives/main/patches/conf-rdkit/test.cpp)
Processing 18/95: [csexp.1.5.2: extract] [dokeysto.4.0.1: http]
Processing 19/95: [csexp.1.5.2: extract] [dokeysto.4.0.1: http] [dolog.6.0.0: extract]
Processing 20/95: [csexp.1.5.2: extract] [dokeysto.4.0.1: http] [dolog.6.0.0: extract] [conf-rdkit: sh]
-> retrieved csexp.1.5.2 (cached)
Processing 20/95: [dokeysto.4.0.1: http] [dolog.6.0.0: extract] [conf-rdkit: sh]
Processing 21/95: [dokeysto.4.0.1: http] [dolog.6.0.0: extract] [dune.3.20.0, dune-configurator.3.20.0: extract] [conf-rdkit: sh]
-> retrieved dolog.6.0.0 (cached)
Processing 21/95: [dokeysto.4.0.1: http] [dune.3.20.0, dune-configurator.3.20.0: extract] [conf-rdkit: sh]
Processing 22/95: [dokeysto.4.0.1: http] [dune.3.20.0, dune-configurator.3.20.0: extract] [extunix.0.4.4: extract] [conf-rdkit: sh]
-> retrieved extunix.0.4.4 (cached)
Processing 22/95: [dokeysto.4.0.1: http] [dune.3.20.0, dune-configurator.3.20.0: extract] [conf-rdkit: sh]
Processing 23/95: [dokeysto.4.0.1: http] [dune.3.20.0, dune-configurator.3.20.0: extract] [line_oriented.1.3.0: extract] [conf-rdkit: sh]
-> retrieved line_oriented.1.3.0 (cached)
Processing 23/95: [dokeysto.4.0.1: http] [dune.3.20.0, dune-configurator.3.20.0: extract] [conf-rdkit: sh]
Processing 24/95: [dokeysto.4.0.1: http] [dune.3.20.0, dune-configurator.3.20.0: extract] [minicli.5.0.2: extract] [conf-rdkit: sh]
-> retrieved minicli.5.0.2 (cached)
Processing 24/95: [dokeysto.4.0.1: http] [dune.3.20.0, dune-configurator.3.20.0: extract] [conf-rdkit: sh]
Processing 25/95: [dokeysto.4.0.1: http] [dune.3.20.0, dune-configurator.3.20.0: extract] [molenc.17.0.1: http] [conf-rdkit: sh]
+ /bin/sh "-c" "c++ test.cpp -o test -I/usr/local/include -I/usr/local/include/rdkit -L/usr/local/lib -lRDKitRDGeneral -DSWIG" (CWD=/home/opam/.opam/5.3.0/.opam-switch/build/conf-rdkit.1)
Processing 25/95: [dokeysto.4.0.1: http] [dune.3.20.0, dune-configurator.3.20.0: extract] [molenc.17.0.1: http] [conf-rdkit: ./test]
+ /home/opam/.opam/5.3.0/.opam-switch/build/conf-rdkit.1/./test (CWD=/home/opam/.opam/5.3.0/.opam-switch/build/conf-rdkit.1)
- 2025.03.1
-> compiled conf-rdkit.1
Processing 25/95: [dokeysto.4.0.1: http] [dune.3.20.0, dune-configurator.3.20.0: extract] [molenc.17.0.1: http]
-> installed conf-rdkit.1
Processing 26/95: [dokeysto.4.0.1: http] [dune.3.20.0, dune-configurator.3.20.0: extract] [molenc.17.0.1: http]
Processing 26/95: [dokeysto.4.0.1: extract] [dune.3.20.0, dune-configurator.3.20.0: extract] [molenc.17.0.1: http]
-> retrieved dokeysto.4.0.1 (https://github.com/UnixJunkie/dokeysto/archive/v4.0.1.tar.gz)
Processing 26/95: [dune.3.20.0, dune-configurator.3.20.0: extract] [molenc.17.0.1: http]
Processing 27/95: [dune.3.20.0, dune-configurator.3.20.0: extract] [molenc.17.0.1: http] [num.1.6: extract]
-> retrieved num.1.6 (cached)
Processing 27/95: [dune.3.20.0, dune-configurator.3.20.0: extract] [molenc.17.0.1: http]
Processing 28/95: [dune.3.20.0, dune-configurator.3.20.0: extract] [molenc.17.0.1: http] [ocaml-compiler-libs.v0.17.0: extract]
Processing 29/95: [dune.3.20.0, dune-configurator.3.20.0: extract] [molenc.17.0.1: http] [ocaml-compiler-libs.v0.17.0: extract] [num: gmake opam-modern]
-> retrieved ocaml-compiler-libs.v0.17.0 (cached)
Processing 29/95: [dune.3.20.0, dune-configurator.3.20.0: extract] [molenc.17.0.1: http] [num: gmake opam-modern]
Processing 30/95: [dune.3.20.0, dune-configurator.3.20.0: extract] [molenc.17.0.1: http] [ocamlfind.1.9.8: extract] [num: gmake opam-modern]
-> retrieved ocamlfind.1.9.8 (cached)
Processing 30/95: [dune.3.20.0, dune-configurator.3.20.0: extract] [molenc.17.0.1: http] [num: gmake opam-modern]
Processing 31/95: [dune.3.20.0, dune-configurator.3.20.0: extract] [molenc.17.0.1: http] [ocamlgraph.2.2.0: extract] [num: gmake opam-modern]
Processing 32/95: [dune.3.20.0, dune-configurator.3.20.0: extract] [molenc.17.0.1: http] [ocamlgraph.2.2.0: extract] [num: gmake opam-modern] [ocamlfind: ./configure]
-> retrieved ocamlgraph.2.2.0 (cached)
Processing 32/95: [dune.3.20.0, dune-configurator.3.20.0: extract] [molenc.17.0.1: http] [num: gmake opam-modern] [ocamlfind: ./configure]
Processing 33/95: [dune.3.20.0, dune-configurator.3.20.0: extract] [molenc.17.0.1: http] [orf.1.0.1: http] [num: gmake opam-modern] [ocamlfind: ./configure]
Processing 33/95: [dune.3.20.0, dune-configurator.3.20.0: extract] [molenc.17.0.1: extract] [orf.1.0.1: http] [num: gmake opam-modern] [ocamlfind: ./configure]
-> retrieved molenc.17.0.1 (https://github.com/UnixJunkie/molenc/archive/refs/tags/v17.0.1.tar.gz)
Processing 33/95: [dune.3.20.0, dune-configurator.3.20.0: extract] [orf.1.0.1: http] [num: gmake opam-modern] [ocamlfind: ./configure]
Processing 34/95: [dune.3.20.0, dune-configurator.3.20.0: extract] [orf.1.0.1: http] [parany.14.0.1: extract] [num: gmake opam-modern] [ocamlfind: ./configure]
-> retrieved parany.14.0.1 (cached)
Processing 34/95: [dune.3.20.0, dune-configurator.3.20.0: extract] [orf.1.0.1: http] [num: gmake opam-modern] [ocamlfind: ./configure]
Processing 35/95: [dune.3.20.0, dune-configurator.3.20.0: extract] [orf.1.0.1: http] [ppx_derivers.1.2.1: extract] [num: gmake opam-modern] [ocamlfind: ./configure]
-> retrieved ppx_derivers.1.2.1 (cached)
Processing 35/95: [dune.3.20.0, dune-configurator.3.20.0: extract] [orf.1.0.1: http] [num: gmake opam-modern] [ocamlfind: ./configure]
Processing 36/95: [dune.3.20.0, dune-configurator.3.20.0: extract] [orf.1.0.1: http] [ppxlib.0.37.0~5.4preview: extract] [num: gmake opam-modern] [ocamlfind: ./configure]
Processing 36/95: [dune.3.20.0, dune-configurator.3.20.0: extract] [orf.1.0.1: extract] [ppxlib.0.37.0~5.4preview: extract] [num: gmake opam-modern] [ocamlfind: ./configure]
-> retrieved ppxlib.0.37.0~5.4preview (cached)
Processing 36/95: [dune.3.20.0, dune-configurator.3.20.0: extract] [orf.1.0.1: extract] [num: gmake opam-modern] [ocamlfind: ./configure]
Processing 37/95: [dune.3.20.0, dune-configurator.3.20.0: extract] [orf.1.0.1: extract] [pyml.20250807: extract] [num: gmake opam-modern] [ocamlfind: ./configure]
-> retrieved orf.1.0.1 (https://github.com/UnixJunkie/orf/archive/refs/tags/v1.0.1.tar.gz)
Processing 37/95: [dune.3.20.0, dune-configurator.3.20.0: extract] [pyml.20250807: extract] [num: gmake opam-modern] [ocamlfind: ./configure]
Processing 38/95: [dune.3.20.0, dune-configurator.3.20.0: extract] [pyml.20250807: extract] [sexplib0.v0.17.0: extract] [num: gmake opam-modern] [ocamlfind: ./configure]
-> retrieved pyml.20250807 (cached)
Processing 38/95: [dune.3.20.0, dune-configurator.3.20.0: extract] [sexplib0.v0.17.0: extract] [num: gmake opam-modern] [ocamlfind: ./configure]
Processing 39/95: [dune.3.20.0, dune-configurator.3.20.0: extract] [sexplib0.v0.17.0: extract] [stdcompat.21.0: extract] [num: gmake opam-modern] [ocamlfind: ./configure]
-> retrieved sexplib0.v0.17.0 (cached)
Processing 39/95: [dune.3.20.0, dune-configurator.3.20.0: extract] [stdcompat.21.0: extract] [num: gmake opam-modern] [ocamlfind: ./configure]
Processing 40/95: [dune.3.20.0, dune-configurator.3.20.0: extract] [stdcompat.21.0: extract] [stdlib-shims.0.3.0: extract] [num: gmake opam-modern] [ocamlfind: ./configure]
-> retrieved stdlib-shims.0.3.0 (cached)
Processing 40/95: [dune.3.20.0, dune-configurator.3.20.0: extract] [stdcompat.21.0: extract] [num: gmake opam-modern] [ocamlfind: ./configure]
Processing 41/95: [dune.3.20.0, dune-configurator.3.20.0: extract] [stdcompat.21.0: extract] [vector3.1.0.0: extract] [num: gmake opam-modern] [ocamlfind: ./configure]
-> retrieved vector3.1.0.0 (cached)
Processing 41/95: [dune.3.20.0, dune-configurator.3.20.0: extract] [stdcompat.21.0: extract] [num: gmake opam-modern] [ocamlfind: ./configure]
-> retrieved stdcompat.21.0 (cached)
Processing 41/95: [dune.3.20.0, dune-configurator.3.20.0: extract] [num: gmake opam-modern] [ocamlfind: ./configure]
-> retrieved dune.3.20.0, dune-configurator.3.20.0 (cached)
Processing 41/95: [num: gmake opam-modern] [ocamlfind: ./configure]
Processing 42/95: [dune: ocaml 39] [num: gmake opam-modern] [ocamlfind: ./configure]
+ /home/opam/.opam/5.3.0/.opam-switch/build/ocamlfind.1.9.8/./configure "-bindir" "/home/opam/.opam/5.3.0/bin" "-sitelib" "/home/opam/.opam/5.3.0/lib" "-mandir" "/home/opam/.opam/5.3.0/man" "-config" "/home/opam/.opam/5.3.0/lib/findlib.conf" "-no-custom" "-no-camlp4" (CWD=/home/opam/.opam/5.3.0/.opam-switch/build/ocamlfind.1.9.8)
- Welcome to findlib version 1.9.8
- Configuring core...
- Checking for #remove_directory...
- Testing threading model...
- systhread_supported: true
- Testing DLLs...
- Testing whether ppxopt can be supported...
- Checking for ocamlc -opaque...
- Checking for ocamlopt -g...
- Configuring libraries...
- unix: found (in +unix)
- dynlink: found (in +dynlink)
- bigarray: not present (possible since 4.08)
- compiler-libs: found
- dbm: not present (normal since 4.00)
- graphics: not present (normal since 4.09)
- num: not present (normal since 4.06)
- ocamlbuild: not present (normal since 4.03)
- ocamldoc: found (in +ocamldoc)
- raw_spacetime: not present (normal since 4.12)
- threads: found (in +threads)
- str: found (in +str)
- labltk: not present (normal since 4.02)
- native dynlink: found
- camlp4: disabled
- bytes: found, installing fake library
- Configuration for bytes written to site-lib-src/bytes/META
- Detecting compiler arguments: (extractor built) ok
-
- About the OCAML core installation:
- Standard library: /home/opam/.opam/5.3.0/lib/ocaml
- Binaries: /home/opam/.opam/5.3.0/bin
- Manual pages: /home/opam/.opam/5.3.0/man
- Multi-threading type: posix
- The directory of site-specific packages will be
- site-lib: /home/opam/.opam/5.3.0/lib
- The configuration file is written to:
- findlib config file: /home/opam/.opam/5.3.0/lib/findlib.conf
- Software will be installed:
- Libraries: in <site-lib>/findlib
- Binaries: /home/opam/.opam/5.3.0/bin
- Manual pages: /home/opam/.opam/5.3.0/man
- topfind script: /home/opam/.opam/5.3.0/lib/ocaml
- Topfind ppxopt support: yes
- Toolbox: no
- Link custom runtime: no
- Need bytes compatibility: no
-
- Configuration has been written to Makefile.config
-
- You can now do 'make all', and optionally 'make opt', to build ocamlfind.
Processing 42/95: [dune: ocaml 39] [num: gmake opam-modern] [ocamlfind: gmake all]
+ /usr/local/bin/gmake "PROFILE=release" "opam-modern" (CWD=/home/opam/.opam/5.3.0/.opam-switch/build/num.1.6)
- /usr/local/bin/gmake -C src all
- gmake[1]: Entering directory '/home/opam/.opam/5.3.0/.opam-switch/build/num.1.6/src'
- ocamlc -ccopt -DBNG_ARCH_amd64 -c bng.c
- ocamlc -ccopt -DBNG_ARCH_amd64 -c nat_stubs.c
- ocamlmklib -oc nums bng.o nat_stubs.o
- ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c int_misc.mli
- ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c int_misc.ml
- ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c nat.mli
- ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c nat.ml
- ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c big_int.mli
- ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c big_int.ml
- ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c arith_flags.mli
- ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c arith_flags.ml
- ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c ratio.mli
- ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c ratio.ml
- ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c num.mli
- ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c num.ml
- ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c arith_status.mli
- ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c arith_status.ml
- ocamlmklib -o nums -oc nums -linkall int_misc.cmo nat.cmo big_int.cmo arith_flags.cmo ratio.cmo num.cmo arith_status.cmo
- cp ../toplevel/num_top_printers.mli ../toplevel/num_top.mli ../toplevel/num_top_printers.ml ../toplevel/num_top.ml .
- ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c num_top_printers.mli
- ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c num_top_printers.ml
- ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c num_top.mli
- ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c num_top.ml
- ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -a -o num_top.cma num_top_printers.cmo num_top.cmo
- echo 'version = "1.7~dev"' > META.top
- cat META.num-top.in >> META.top
- ocamlopt -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c int_misc.ml
- ocamlopt -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c nat.ml
- ocamlopt -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c big_int.ml
- ocamlopt -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c arith_flags.ml
- ocamlopt -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c ratio.ml
- ocamlopt -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c num.ml
- ocamlopt -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c arith_status.ml
- ocamlmklib -o nums -oc nums -linkall int_misc.cmx nat.cmx big_int.cmx arith_flags.cmx ratio.cmx num.cmx arith_status.cmx
- ocamlopt -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -I . -shared -o nums.cmxs nums.cmxa
- gmake[1]: Leaving directory '/home/opam/.opam/5.3.0/.opam-switch/build/num.1.6/src'
- cp src/num-modern.install num.install
-> compiled num.1.6
Processing 42/95: [dune: ocaml 39] [ocamlfind: gmake all]
-> installed num.1.6
Processing 43/95: [dune: ocaml 39] [ocamlfind: gmake all]
+ /usr/local/bin/gmake "all" (CWD=/home/opam/.opam/5.3.0/.opam-switch/build/ocamlfind.1.9.8)
- for p in findlib; do ( cd src/$p; /usr/local/bin/gmake all ) || exit; done
- gmake[1]: Entering directory '/home/opam/.opam/5.3.0/.opam-switch/build/ocamlfind.1.9.8/src/findlib'
- ocamllex fl_meta.mll
- 22 states, 392 transitions, table size 1700 bytes
- USE_CYGPATH="0"; \
- export USE_CYGPATH; \
- cat findlib_config.mlp | \
- ../../tools/patch '@CONFIGFILE@' '/home/opam/.opam/5.3.0/lib/findlib.conf' | \
- ../../tools/patch '@STDLIB@' '/home/opam/.opam/5.3.0/lib/ocaml' | \
- ../../tools/patch '@RELATIVE_PATHS@' 'false' | \
- sed -e 's;@AUTOLINK@;true;g' \
- -e 's;@SYSTEM@;freebsd;g' \
- >findlib_config.ml
- if [ "true" = "true" ]; then \
- cp topfind.ml.in topfind.ml; \
- else \
- sed -e '/PPXOPT_BEGIN/,/PPXOPT_END/ d' topfind.ml.in \
- > topfind.ml ; \
- fi
- ocamldep *.ml *.mli >depend
- ocamlc -I +compiler-libs -opaque -I +unix -I +dynlink -g -c fl_compat.ml
- ocamlc -I +compiler-libs -opaque -I +unix -I +dynlink -g -c fl_split.ml
- ocamlc -I +compiler-libs -opaque -I +unix -I +dynlink -g -c findlib_config.ml
- ocamlc -I +compiler-libs -opaque -I +unix -I +dynlink -g -c fl_metatoken.ml
- ocamlc -I +compiler-libs -opaque -I +unix -I +dynlink -g -c fl_meta.ml
- ocamlc -I +compiler-libs -opaque -I +unix -I +dynlink -c fl_metascanner.mli
- ocamlc -I +compiler-libs -opaque -I +unix -I +dynlink -g -c fl_metascanner.ml
- ocamlc -I +compiler-libs -opaque -I +unix -I +dynlink -c fl_topo.mli
- ocamlc -I +compiler-libs -opaque -I +unix -I +dynlink -g -c fl_topo.ml
- ocamlc -I +compiler-libs -opaque -I +unix -I +dynlink -c fl_package_base.mli
- ocamlc -I +compiler-libs -opaque -I +unix -I +dynlink -g -c fl_package_base.ml
- ocamlc -I +compiler-libs -opaque -I +unix -I +dynlink -c findlib.mli
- ocamlc -I +compiler-libs -opaque -I +unix -I +dynlink -g -c findlib.ml
- ocamlc -I +compiler-libs -opaque -I +unix -I +dynlink -g -c fl_args.ml
- ocamlc -I +compiler-libs -opaque -I +unix -I +dynlink -g -c fl_lint.ml
- ocamlc -I +compiler-libs -a -o findlib.cma fl_compat.cmo fl_split.cmo findlib_config.cmo fl_metatoken.cmo fl_meta.cmo fl_metascanner.cmo fl_topo.cmo fl_package_base.cmo findlib.cmo fl_args.cmo fl_lint.cmo
- ocamlc -I +compiler-libs -opaque -I +unix -I +dynlink -g -c ocaml_args.ml
- ocamlc -I +compiler-libs -opaque -I +unix -I +dynlink -g -c frontend.ml
- ocamlc -I +compiler-libs -o ocamlfind -g findlib.cma unix.cma \
- -I +unix -I +dynlink ocaml_args.cmo frontend.cmo
- ocamlc -I +compiler-libs -opaque -I +unix -I +dynlink -c topfind.mli
- ocamlc -I +compiler-libs -opaque -I +unix -I +dynlink -g -c topfind.ml
- File "topfind.ml", line 128, characters 40-63:
- 128 | match Hashtbl.find Toploop.directive_table "ppx" with
- ^^^^^^^^^^^^^^^^^^^^^^^
- Alert deprecated: Toploop.directive_table
-
- File "topfind.ml", line 258, characters 4-27:
- 258 | Toploop.directive_table
- ^^^^^^^^^^^^^^^^^^^^^^^
- Alert deprecated: Toploop.directive_table
-
- File "topfind.ml", line 268, characters 4-27:
- 268 | Toploop.directive_table
- ^^^^^^^^^^^^^^^^^^^^^^^
- Alert deprecated: Toploop.directive_table
-
- File "topfind.ml", line 280, characters 4-27:
- 280 | Toploop.directive_table
- ^^^^^^^^^^^^^^^^^^^^^^^
- Alert deprecated: Toploop.directive_table
-
- File "topfind.ml", line 293, characters 4-27:
- 293 | Toploop.directive_table
- ^^^^^^^^^^^^^^^^^^^^^^^
- Alert deprecated: Toploop.directive_table
-
- File "topfind.ml", line 307, characters 4-27:
- 307 | Toploop.directive_table
- ^^^^^^^^^^^^^^^^^^^^^^^
- Alert deprecated: Toploop.directive_table
-
- File "topfind.ml", line 319, characters 4-27:
- 319 | Toploop.directive_table
- ^^^^^^^^^^^^^^^^^^^^^^^
- Alert deprecated: Toploop.directive_table
- ocamlc -I +compiler-libs -a -o findlib_top.cma topfind.cmo
- if [ "1" = "1" ]; then \
- cp topfind.in topfind.compat.in; \
- else \
- sed -e '/REMOVE_DIRECTORY_BEGIN/,/REMOVE_DIRECTORY_END/ d' topfind.in \
- > topfind.compat.in ; \
- fi
- USE_CYGPATH="0"; \
- export USE_CYGPATH; \
- cat topfind.compat.in | \
- ../../tools/patch '@SITELIB@' '/home/opam/.opam/5.3.0/lib' | \
- ../../tools/patch '@RELATIVE_PATHS@' 'false' \
- >topfind
- ocamlc -I +compiler-libs -opaque -I +unix -I +dynlink -c fl_dynload.mli
- ocamlc -I +compiler-libs -opaque -I +unix -I +dynlink -g -c fl_dynload.ml
- ocamlc -I +compiler-libs -a -o findlib_dynload.cma fl_dynload.cmo
- gmake[1]: Leaving directory '/home/opam/.opam/5.3.0/.opam-switch/build/ocamlfind.1.9.8/src/findlib'
- /usr/local/bin/gmake all-config
- gmake[1]: Entering directory '/home/opam/.opam/5.3.0/.opam-switch/build/ocamlfind.1.9.8'
- if [ "false" = "true" ]; then \
- /usr/local/bin/gmake findlib-relative; \
- else \
- /usr/local/bin/gmake findlib-absolute; \
- fi
- gmake[2]: Entering directory '/home/opam/.opam/5.3.0/.opam-switch/build/ocamlfind.1.9.8'
- USE_CYGPATH="0"; \
- export USE_CYGPATH; \
- cat findlib.conf.in | \
- tools/patch '@SITELIB@' '/home/opam/.opam/5.3.0/lib' | \
- tools/patch '@FINDLIB_PATH@' '/home/opam/.opam/5.3.0/lib/ocaml:/home/opam/.opam/5.3.0/lib' -p >findlib.conf
- if ./tools/cmd_from_same_dir ocamlc; then \
- echo 'ocamlc="ocamlc.opt"' >>findlib.conf; \
- fi
- if ./tools/cmd_from_same_dir ocamlopt; then \
- echo 'ocamlopt="ocamlopt.opt"' >>findlib.conf; \
- fi
- if ./tools/cmd_from_same_dir ocamldep; then \
- echo 'ocamldep="ocamldep.opt"' >>findlib.conf; \
- fi
- if ./tools/cmd_from_same_dir ocamldoc; then \
- echo 'ocamldoc="ocamldoc.opt"' >>findlib.conf; \
- fi
- gmake[2]: Leaving directory '/home/opam/.opam/5.3.0/.opam-switch/build/ocamlfind.1.9.8'
- gmake[1]: Leaving directory '/home/opam/.opam/5.3.0/.opam-switch/build/ocamlfind.1.9.8'
Processing 43/95: [dune: ocaml 39] [ocamlfind: gmake opt]
+ /usr/local/bin/gmake "opt" (CWD=/home/opam/.opam/5.3.0/.opam-switch/build/ocamlfind.1.9.8)
- for p in findlib; do ( cd src/$p; /usr/local/bin/gmake opt ) || exit; done
- gmake[1]: Entering directory '/home/opam/.opam/5.3.0/.opam-switch/build/ocamlfind.1.9.8/src/findlib'
- ocamlopt -I +compiler-libs -g -opaque -I +unix -I +dynlink -c fl_compat.ml
- ocamlopt -I +compiler-libs -g -opaque -I +unix -I +dynlink -c fl_split.ml
- ocamlopt -I +compiler-libs -g -opaque -I +unix -I +dynlink -c findlib_config.ml
- ocamlopt -I +compiler-libs -g -opaque -I +unix -I +dynlink -c fl_metatoken.ml
- ocamlopt -I +compiler-libs -g -opaque -I +unix -I +dynlink -c fl_meta.ml
- ocamlopt -I +compiler-libs -g -opaque -I +unix -I +dynlink -c fl_metascanner.ml
- ocamlopt -I +compiler-libs -g -opaque -I +unix -I +dynlink -c fl_topo.ml
- ocamlopt -I +compiler-libs -g -opaque -I +unix -I +dynlink -c fl_package_base.ml
- ocamlopt -I +compiler-libs -g -opaque -I +unix -I +dynlink -c findlib.ml
- ocamlopt -I +compiler-libs -g -opaque -I +unix -I +dynlink -c fl_args.ml
- ocamlopt -I +compiler-libs -g -opaque -I +unix -I +dynlink -c fl_lint.ml
- ocamlopt -I +compiler-libs -g -a -o findlib.cmxa fl_compat.cmx fl_split.cmx findlib_config.cmx fl_metatoken.cmx fl_meta.cmx fl_metascanner.cmx fl_topo.cmx fl_package_base.cmx findlib.cmx fl_args.cmx fl_lint.cmx
- if [ 1 -gt 0 ]; then \
- ocamlopt -I +compiler-libs -g -shared -o findlib.cmxs fl_compat.cmx fl_split.cmx findlib_config.cmx fl_metatoken.cmx fl_meta.cmx fl_metascanner.cmx fl_topo.cmx fl_package_base.cmx findlib.cmx fl_args.cmx fl_lint.cmx; \
- fi
- ocamlopt -I +compiler-libs -g -opaque -I +unix -I +dynlink -c ocaml_args.ml
- ocamlopt -I +compiler-libs -g -opaque -I +unix -I +dynlink -c frontend.ml
- ocamlopt -I +compiler-libs -g -o ocamlfind_opt findlib.cmxa unix.cmxa \
- -I +unix -I +dynlink ocaml_args.cmx frontend.cmx
- ocamlopt -I +compiler-libs -g -opaque -I +unix -I +dynlink -c topfind.ml
- File "topfind.ml", line 128, characters 40-63:
- 128 | match Hashtbl.find Toploop.directive_table "ppx" with
- ^^^^^^^^^^^^^^^^^^^^^^^
- Alert deprecated: Toploop.directive_table
-
- File "topfind.ml", line 258, characters 4-27:
- 258 | Toploop.directive_table
- ^^^^^^^^^^^^^^^^^^^^^^^
- Alert deprecated: Toploop.directive_table
-
- File "topfind.ml", line 268, characters 4-27:
- 268 | Toploop.directive_table
- ^^^^^^^^^^^^^^^^^^^^^^^
- Alert deprecated: Toploop.directive_table
-
- File "topfind.ml", line 280, characters 4-27:
- 280 | Toploop.directive_table
- ^^^^^^^^^^^^^^^^^^^^^^^
- Alert deprecated: Toploop.directive_table
-
- File "topfind.ml", line 293, characters 4-27:
- 293 | Toploop.directive_table
- ^^^^^^^^^^^^^^^^^^^^^^^
- Alert deprecated: Toploop.directive_table
-
- File "topfind.ml", line 307, characters 4-27:
- 307 | Toploop.directive_table
- ^^^^^^^^^^^^^^^^^^^^^^^
- Alert deprecated: Toploop.directive_table
-
- File "topfind.ml", line 319, characters 4-27:
- 319 | Toploop.directive_table
- ^^^^^^^^^^^^^^^^^^^^^^^
- Alert deprecated: Toploop.directive_table
- ocamlopt -I +compiler-libs -g -a -o findlib_top.cmxa topfind.cmx
- if [ 1 -gt 0 ]; then \
- ocamlopt -I +compiler-libs -g -shared -o findlib_top.cmxs topfind.cmx; \
- fi
- ocamlopt -I +compiler-libs -g -opaque -I +unix -I +dynlink -c fl_dynload.ml
- ocamlopt -I +compiler-libs -g -a -o findlib_dynload.cmxa fl_dynload.cmx
- if [ 1 -gt 0 ]; then \
- ocamlopt -I +compiler-libs -g -shared -o findlib_dynload.cmxs fl_dynload.cmx; \
- fi
- gmake[1]: Leaving directory '/home/opam/.opam/5.3.0/.opam-switch/build/ocamlfind.1.9.8/src/findlib'
-> compiled ocamlfind.1.9.8
Processing 43/95: [dune: ocaml 39]
Processing 44/95: [dune: ocaml 39] [ocamlfind: gmake install]
+ /usr/local/bin/gmake "install" (CWD=/home/opam/.opam/5.3.0/.opam-switch/build/ocamlfind.1.9.8)
- if [ "0" -eq 1 ]; then \
- for x in camlp4 dbm graphics labltk num ocamlbuild; do \
- if [ -f "/home/opam/.opam/5.3.0/lib/$x/META" ]; then \
- if ! grep -Fq '[distributed with Ocaml]' "//home/opam/.opam/5.3.0/lib/$x/META"; then \
- rm -f site-lib-src/$x/META; \
- fi; \
- fi; \
- done; \
- test -f "site-lib-src/num/META" || rm -f "site-lib-src/num-top/META"; \
- fi
- echo 'SITELIB_META =' > Makefile.packages.in
- for x in `ls site-lib-src`; do test ! -f "site-lib-src/$x/META" || echo $x >> Makefile.packages.in; done
- tr '\n' ' ' < Makefile.packages.in > Makefile.packages
- rm Makefile.packages.in
- install -d "/home/opam/.opam/5.3.0/bin"
- install -d "/home/opam/.opam/5.3.0/man"
- /usr/local/bin/gmake install-config
- gmake[1]: Entering directory '/home/opam/.opam/5.3.0/.opam-switch/build/ocamlfind.1.9.8'
- install -d "`dirname \"/home/opam/.opam/5.3.0/lib/findlib.conf\"`"
- test -f "/home/opam/.opam/5.3.0/lib/findlib.conf" || cp findlib.conf "/home/opam/.opam/5.3.0/lib/findlib.conf"
- gmake[1]: Leaving directory '/home/opam/.opam/5.3.0/.opam-switch/build/ocamlfind.1.9.8'
- for p in findlib; do ( cd src/$p; /usr/local/bin/gmake install ); done
- gmake[1]: Entering directory '/home/opam/.opam/5.3.0/.opam-switch/build/ocamlfind.1.9.8/src/findlib'
- install -d "/home/opam/.opam/5.3.0/lib/findlib"
- install -d "/home/opam/.opam/5.3.0/bin"
- test 1 -eq 0 || install -d "/home/opam/.opam/5.3.0/lib/ocaml"
- test 1 -eq 0 || cp topfind "/home/opam/.opam/5.3.0/lib/ocaml/"
- files=` ../../tools/collect_files ../../Makefile.config \
- findlib.cmi findlib.mli findlib.cma findlib.cmxa findlib.a findlib.cmxs \
- findlib_config.cmi findlib_config.ml topfind.cmi topfind.mli \
- fl_args.cmi fl_lint.cmi fl_meta.cmi fl_split.cmi fl_topo.cmi ocaml_args.cmi \
- fl_package_base.mli fl_package_base.cmi fl_metascanner.mli fl_metascanner.cmi \
- fl_metatoken.cmi findlib_top.cma findlib_top.cmxa findlib_top.a findlib_top.cmxs \
- findlib_dynload.cma findlib_dynload.cmxa findlib_dynload.a findlib_dynload.cmxs fl_dynload.mli fl_dynload.cmi \
- META` && \
- cp $files "/home/opam/.opam/5.3.0/lib/findlib/"
- f="ocamlfind"; { test -f ocamlfind_opt && f="ocamlfind_opt"; }; \
- install -c $f "/home/opam/.opam/5.3.0/bin/ocamlfind"
- # the following "if" block is only needed for 4.00beta2
- if [ 1 -eq 0 -a -f "/home/opam/.opam/5.3.0/lib/ocaml/compiler-libs/topdirs.cmi" ]; then \
- cd "/home/opam/.opam/5.3.0/lib/ocaml/compiler-libs/"; \
- cp topdirs.cmi toploop.cmi "/home/opam/.opam/5.3.0/lib/findlib/"; \
- fi
- gmake[1]: Leaving directory '/home/opam/.opam/5.3.0/.opam-switch/build/ocamlfind.1.9.8/src/findlib'
- /usr/local/bin/gmake install-meta
- gmake[1]: Entering directory '/home/opam/.opam/5.3.0/.opam-switch/build/ocamlfind.1.9.8'
- for x in bytes ; do install -d "/home/opam/.opam/5.3.0/lib/$x"; cp site-lib-src/$x/META "/home/opam/.opam/5.3.0/lib/$x/META.tmp" && mv "/home/opam/.opam/5.3.0/lib/$x/META.tmp" "/home/opam/.opam/5.3.0/lib/$x/META"; done
- install -d "/home/opam/.opam/5.3.0/lib/findlib"; cp Makefile.packages "/home/opam/.opam/5.3.0/lib/findlib/Makefile.packages"
- gmake[1]: Leaving directory '/home/opam/.opam/5.3.0/.opam-switch/build/ocamlfind.1.9.8'
- test ! -f 'site-lib-src/num-top/META' || { cd src/findlib; /usr/local/bin/gmake install-num-top; }
- test ! -f 'site-lib-src/camlp4/META' || install -c tools/safe_camlp4 "/home/opam/.opam/5.3.0/bin"
- /usr/local/bin/gmake install-doc
- gmake[1]: Entering directory '/home/opam/.opam/5.3.0/.opam-switch/build/ocamlfind.1.9.8'
- install -d "/home/opam/.opam/5.3.0/man/man1" "/home/opam/.opam/5.3.0/man/man3" "/home/opam/.opam/5.3.0/man/man5"
- cp doc/ref-man/ocamlfind.1 "/home/opam/.opam/5.3.0/man/man1"
- cp: doc/ref-man/ocamlfind.1: No such file or directory
- gmake[1]: [Makefile:91: install-doc] Error 1 (ignored)
- cp doc/ref-man/META.5 doc/ref-man/site-lib.5 doc/ref-man/findlib.conf.5 "/home/opam/.opam/5.3.0/man/man5"
- cp: doc/ref-man/META.5: No such file or directory
- cp: doc/ref-man/site-lib.5: No such file or directory
- cp: doc/ref-man/findlib.conf.5: No such file or directory
- gmake[1]: [Makefile:92: install-doc] Error 1 (ignored)
- gmake[1]: Leaving directory '/home/opam/.opam/5.3.0/.opam-switch/build/ocamlfind.1.9.8'
-> installed ocamlfind.1.9.8
Processing 44/95: [dune: ocaml 39]
Processing 45/95: [dune: ocaml 39]
-> installed base-bytes.base
Processing 46/95: [dune: ocaml 39]
+ /home/opam/.opam/5.3.0/bin/ocaml "boot/bootstrap.ml" "-j" "39" (CWD=/home/opam/.opam/5.3.0/.opam-switch/build/dune.3.20.0)
- ocamlc -output-complete-exe -g -o .duneboot.exe -I boot -I +unix unix.cma boot/libs.ml boot/duneboot.ml
- ./.duneboot.exe -j 39
-
Processing 46/95: [dune: ./_boot/dune.exe build]
+ /home/opam/.opam/5.3.0/.opam-switch/build/dune.3.20.0/./_boot/dune.exe "build" "dune.install" "--release" "--profile" "dune-bootstrap" "-j" "39" (CWD=/home/opam/.opam/5.3.0/.opam-switch/build/dune.3.20.0)
-> compiled dune.3.20.0
-> installed dune.3.20.0
Processing 48/95: [camlp-streams: dune build]
Processing 49/95: [camlp-streams: dune build] [cpu: autoconf]
Processing 50/95: [camlp-streams: dune build] [cpu: autoconf] [csexp: dune build]
Processing 51/95: [camlp-streams: dune build] [cpu: autoconf] [csexp: dune build] [dolog: dune build]
Processing 52/95: [camlp-streams: dune build] [cpu: autoconf] [csexp: dune build] [dolog: dune build] [minicli: dune build]
Processing 53/95: [camlp-streams: dune build] [cpu: autoconf] [csexp: dune build] [dolog: dune build] [minicli: dune build] [ocaml-compiler-libs: dune build]
Processing 54/95: [camlp-streams: dune build] [cpu: autoconf] [csexp: dune build] [dolog: dune build] [minicli: dune build] [ocaml-compiler-libs: dune build] [ocamlgraph: dune build]
Processing 55/95: [camlp-streams: dune build] [cpu: autoconf] [csexp: dune build] [dolog: dune build] [minicli: dune build] [ocaml-compiler-libs: dune build] [ocamlgraph: dune build] [ppx_derivers: dune build]
Processing 56/95: [camlp-streams: dune build] [cpu: autoconf] [csexp: dune build] [dolog: dune build] [minicli: dune build] [ocaml-compiler-libs: dune build] [ocamlgraph: dune build] [ppx_derivers: dune build] [sexplib0: dune build]
Processing 57/95: [camlp-streams: dune build] [cpu: autoconf] [csexp: dune build] [dolog: dune build] [minicli: dune build] [ocaml-compiler-libs: dune build] [ocamlgraph: dune build] [ppx_derivers: dune build] [sexplib0: dune build] [stdcompat: dune build]
Processing 58/95: [camlp-streams: dune build] [cpu: autoconf] [csexp: dune build] [dolog: dune build] [minicli: dune build] [ocaml-compiler-libs: dune build] [ocamlgraph: dune build] [ppx_derivers: dune build] [sexplib0: dune build] [stdcompat: dune build] [stdlib-shims: dune build]
Processing 59/95: [camlp-streams: dune build] [cpu: autoconf] [csexp: dune build] [dolog: dune build] [minicli: dune build] [ocaml-compiler-libs: dune build] [ocamlgraph: dune build] [ppx_derivers: dune build] [sexplib0: dune build] [stdcompat: dune build] [stdlib-shims: dune build] [vector3: dune build]
+ /home/opam/.opam/5.3.0/bin/dune "build" "-p" "ppx_derivers" "-j" "39" (CWD=/home/opam/.opam/5.3.0/.opam-switch/build/ppx_derivers.1.2.1)
-> compiled ppx_derivers.1.2.1
Processing 59/95: [camlp-streams: dune build] [cpu: autoconf] [csexp: dune build] [dolog: dune build] [minicli: dune build] [ocaml-compiler-libs: dune build] [ocamlgraph: dune build] [sexplib0: dune build] [stdcompat: dune build] [stdlib-shims: dune build] [vector3: dune build]
-> installed ppx_derivers.1.2.1
Processing 60/95: [camlp-streams: dune build] [cpu: autoconf] [csexp: dune build] [dolog: dune build] [minicli: dune build] [ocaml-compiler-libs: dune build] [ocamlgraph: dune build] [sexplib0: dune build] [stdcompat: dune build] [stdlib-shims: dune build] [vector3: dune build]
+ /home/opam/.opam/5.3.0/bin/dune "build" "-p" "minicli" "-j" "39" (CWD=/home/opam/.opam/5.3.0/.opam-switch/build/minicli.5.0.2)
-> compiled minicli.5.0.2
Processing 60/95: [camlp-streams: dune build] [cpu: autoconf] [csexp: dune build] [dolog: dune build] [ocaml-compiler-libs: dune build] [ocamlgraph: dune build] [sexplib0: dune build] [stdcompat: dune build] [stdlib-shims: dune build] [vector3: dune build]
-> installed minicli.5.0.2
Processing 61/95: [camlp-streams: dune build] [cpu: autoconf] [csexp: dune build] [dolog: dune build] [ocaml-compiler-libs: dune build] [ocamlgraph: dune build] [sexplib0: dune build] [stdcompat: dune build] [stdlib-shims: dune build] [vector3: dune build]
+ /home/opam/.opam/5.3.0/bin/dune "build" "-p" "dolog" "-j" "39" (CWD=/home/opam/.opam/5.3.0/.opam-switch/build/dolog.6.0.0)
-> compiled dolog.6.0.0
Processing 61/95: [camlp-streams: dune build] [cpu: autoconf] [csexp: dune build] [ocaml-compiler-libs: dune build] [ocamlgraph: dune build] [sexplib0: dune build] [stdcompat: dune build] [stdlib-shims: dune build] [vector3: dune build]
-> installed dolog.6.0.0
Processing 62/95: [camlp-streams: dune build] [cpu: autoconf] [csexp: dune build] [ocaml-compiler-libs: dune build] [ocamlgraph: dune build] [sexplib0: dune build] [stdcompat: dune build] [stdlib-shims: dune build] [vector3: dune build]
+ /home/opam/.opam/5.3.0/bin/dune "build" "-p" "csexp" "-j" "39" "@install" (CWD=/home/opam/.opam/5.3.0/.opam-switch/build/csexp.1.5.2)
- (cd _build/default && /home/opam/.opam/5.3.0/bin/ocamlc.opt -w -40 -g -bin-annot -bin-annot-occurrences -I src/.csexp.objs/byte -cmi-file src/.csexp.objs/byte/csexp.cmi -no-alias-deps -o src/.csexp.objs/byte/csexp.cmo -c -impl src/csexp.ml)
- File "src/csexp.ml", line 236, characters 7-14:
- 236 | [@@inlined always]
- ^^^^^^^
- Warning 53 [misplaced-attribute]: the "inlined" attribute cannot appear in this context
- (cd _build/default && /home/opam/.opam/5.3.0/bin/ocamlopt.opt -w -40 -g -I src/.csexp.objs/byte -I src/.csexp.objs/native -cmi-file src/.csexp.objs/byte/csexp.cmi -no-alias-deps -o src/.csexp.objs/native/csexp.cmx -c -impl src/csexp.ml)
- File "src/csexp.ml", line 236, characters 7-14:
- 236 | [@@inlined always]
- ^^^^^^^
- Warning 53 [misplaced-attribute]: the "inlined" attribute cannot appear in this context
-> compiled csexp.1.5.2
Processing 62/95: [camlp-streams: dune build] [cpu: autoconf] [ocaml-compiler-libs: dune build] [ocamlgraph: dune build] [sexplib0: dune build] [stdcompat: dune build] [stdlib-shims: dune build] [vector3: dune build]
-> installed csexp.1.5.2
Processing 63/95: [camlp-streams: dune build] [cpu: autoconf] [ocaml-compiler-libs: dune build] [ocamlgraph: dune build] [sexplib0: dune build] [stdcompat: dune build] [stdlib-shims: dune build] [vector3: dune build]
Processing 64/95: [camlp-streams: dune build] [cpu: autoconf] [dune-configurator: rm] [ocaml-compiler-libs: dune build] [ocamlgraph: dune build] [sexplib0: dune build] [stdcompat: dune build] [stdlib-shims: dune build] [vector3: dune build]
+ /home/opam/.opam/5.3.0/bin/dune "build" "-p" "vector3" "-j" "39" (CWD=/home/opam/.opam/5.3.0/.opam-switch/build/vector3.1.0.0)
-> compiled vector3.1.0.0
Processing 64/95: [camlp-streams: dune build] [cpu: autoconf] [dune-configurator: rm] [ocaml-compiler-libs: dune build] [ocamlgraph: dune build] [sexplib0: dune build] [stdcompat: dune build] [stdlib-shims: dune build]
-> installed vector3.1.0.0
Processing 65/95: [camlp-streams: dune build] [cpu: autoconf] [dune-configurator: rm] [ocaml-compiler-libs: dune build] [ocamlgraph: dune build] [sexplib0: dune build] [stdcompat: dune build] [stdlib-shims: dune build]
+ /bin/rm "-rf" "vendor/csexp" (CWD=/home/opam/.opam/5.3.0/.opam-switch/build/dune-configurator.3.20.0)
+ /home/opam/.opam/5.3.0/bin/dune "build" "-p" "stdlib-shims" "-j" "39" (CWD=/home/opam/.opam/5.3.0/.opam-switch/build/stdlib-shims.0.3.0)
-> compiled stdlib-shims.0.3.0
Processing 65/95: [camlp-streams: dune build] [cpu: autoconf] [dune-configurator: rm] [ocaml-compiler-libs: dune build] [ocamlgraph: dune build] [sexplib0: dune build] [stdcompat: dune build]
-> installed stdlib-shims.0.3.0
Processing 66/95: [camlp-streams: dune build] [cpu: autoconf] [dune-configurator: rm] [ocaml-compiler-libs: dune build] [ocamlgraph: dune build] [sexplib0: dune build] [stdcompat: dune build]
+ /bin/rm "-rf" "vendor/pp" (CWD=/home/opam/.opam/5.3.0/.opam-switch/build/dune-configurator.3.20.0)
Processing 66/95: [camlp-streams: dune build] [cpu: autoconf] [dune-configurator: dune build] [ocaml-compiler-libs: dune build] [ocamlgraph: dune build] [sexplib0: dune build] [stdcompat: dune build]
+ /home/opam/.opam/5.3.0/bin/dune "build" "-p" "stdcompat" "-j" "39" (CWD=/home/opam/.opam/5.3.0/.opam-switch/build/stdcompat.21.0)
-> compiled stdcompat.21.0
Processing 66/95: [camlp-streams: dune build] [cpu: autoconf] [dune-configurator: dune build] [ocaml-compiler-libs: dune build] [ocamlgraph: dune build] [sexplib0: dune build]
-> installed stdcompat.21.0
Processing 67/95: [camlp-streams: dune build] [cpu: autoconf] [dune-configurator: dune build] [ocaml-compiler-libs: dune build] [ocamlgraph: dune build] [sexplib0: dune build]
Processing 68/95: [camlp-streams: dune build] [cpu: autoconf] [dune-configurator: dune build] [ocaml-compiler-libs: dune build] [ocamlgraph: dune build] [pyml: dune build] [sexplib0: dune build]
+ /home/opam/.opam/5.3.0/bin/dune "build" "-p" "sexplib0" "-j" "39" (CWD=/home/opam/.opam/5.3.0/.opam-switch/build/sexplib0.v0.17.0)
-> compiled sexplib0.v0.17.0
Processing 68/95: [camlp-streams: dune build] [cpu: autoconf] [dune-configurator: dune build] [ocaml-compiler-libs: dune build] [ocamlgraph: dune build] [pyml: dune build]
-> installed sexplib0.v0.17.0
Processing 69/95: [camlp-streams: dune build] [cpu: autoconf] [dune-configurator: dune build] [ocaml-compiler-libs: dune build] [ocamlgraph: dune build] [pyml: dune build]
+ /home/opam/.opam/5.3.0/bin/dune "build" "-p" "ocamlgraph" "-j" "39" "@install" (CWD=/home/opam/.opam/5.3.0/.opam-switch/build/ocamlgraph.2.2.0)
-> compiled ocamlgraph.2.2.0
Processing 69/95: [camlp-streams: dune build] [cpu: autoconf] [dune-configurator: dune build] [ocaml-compiler-libs: dune build] [pyml: dune build]
-> installed ocamlgraph.2.2.0
Processing 70/95: [camlp-streams: dune build] [cpu: autoconf] [dune-configurator: dune build] [ocaml-compiler-libs: dune build] [pyml: dune build]
+ /home/opam/.opam/5.3.0/bin/dune "build" "-p" "ocaml-compiler-libs" "-j" "39" (CWD=/home/opam/.opam/5.3.0/.opam-switch/build/ocaml-compiler-libs.v0.17.0)
-> compiled ocaml-compiler-libs.v0.17.0
Processing 70/95: [camlp-streams: dune build] [cpu: autoconf] [dune-configurator: dune build] [pyml: dune build]
-> installed ocaml-compiler-libs.v0.17.0
Processing 71/95: [camlp-streams: dune build] [cpu: autoconf] [dune-configurator: dune build] [pyml: dune build]
Processing 72/95: [camlp-streams: dune build] [cpu: autoconf] [dune-configurator: dune build] [ppxlib: dune build] [pyml: dune build]
+ /usr/local/bin/autoconf (CWD=/home/opam/.opam/5.3.0/.opam-switch/build/cpu.2.0.0)
- configure.ac:8: warning: The macro 'AC_HEADER_STDC' is obsolete.
- configure.ac:8: You should run autoupdate.
- ./lib/autoconf/headers.m4:663: AC_HEADER_STDC is expanded from...
- configure.ac:8: the top level
Processing 72/95: [camlp-streams: dune build] [cpu: autoheader] [dune-configurator: dune build] [ppxlib: dune build] [pyml: dune build]
+ /home/opam/.opam/5.3.0/bin/dune "build" "-p" "camlp-streams" "-j" "39" "@install" (CWD=/home/opam/.opam/5.3.0/.opam-switch/build/camlp-streams.5.0.1)
-> compiled camlp-streams.5.0.1
Processing 72/95: [cpu: autoheader] [dune-configurator: dune build] [ppxlib: dune build] [pyml: dune build]
-> installed camlp-streams.5.0.1
Processing 73/95: [cpu: autoheader] [dune-configurator: dune build] [ppxlib: dune build] [pyml: dune build]
Processing 74/95: [batteries: dune build] [cpu: autoheader] [dune-configurator: dune build] [ppxlib: dune build] [pyml: dune build]
+ /usr/local/bin/autoheader (CWD=/home/opam/.opam/5.3.0/.opam-switch/build/cpu.2.0.0)
Processing 74/95: [batteries: dune build] [cpu: ./configure] [dune-configurator: dune build] [ppxlib: dune build] [pyml: dune build]
+ /home/opam/.opam/5.3.0/bin/dune "build" "-p" "dune-configurator" "-j" "39" "@install" (CWD=/home/opam/.opam/5.3.0/.opam-switch/build/dune-configurator.3.20.0)
-> compiled dune-configurator.3.20.0
Processing 74/95: [batteries: dune build] [cpu: ./configure] [ppxlib: dune build] [pyml: dune build]
-> installed dune-configurator.3.20.0
Processing 75/95: [batteries: dune build] [cpu: ./configure] [ppxlib: dune build] [pyml: dune build]
+ /home/opam/.opam/5.3.0/.opam-switch/build/cpu.2.0.0/./configure (CWD=/home/opam/.opam/5.3.0/.opam-switch/build/cpu.2.0.0)
- checking for ocamlc... ocamlc
- OCaml version is 5.3.0
- OCaml library path is /home/opam/.opam/5.3.0/lib/ocaml
- checking for ocamlopt... ocamlopt
- checking for ocamlc.opt... ocamlc.opt
- checking for ocamlopt.opt... ocamlopt.opt
- checking for dynlink.cmxa... no
- checking for ocaml... ocaml
- checking for ocamldep... ocamldep
- checking for ocamlmktop... ocamlmktop
- checking for ocamlmklib... ocamlmklib
- checking for ocamldoc... ocamldoc
- checking for ocamlbuild... no
- checking for gcc... no
- checking for cc... cc
- checking whether the C compiler works... yes
- checking for C compiler default output file name... a.out
- checking for suffix of executables...
- checking whether we are cross compiling... no
- checking for suffix of object files... o
- checking whether the compiler supports GNU C... yes
- checking whether cc accepts -g... yes
- checking for cc option to enable C11 features... none needed
- checking for stdio.h... yes
- checking for stdlib.h... yes
- checking for string.h... yes
- checking for inttypes.h... yes
- checking for stdint.h... yes
- checking for strings.h... yes
- checking for sys/stat.h... yes
- checking for sys/types.h... yes
- checking for unistd.h... yes
- checking for grep that handles long lines and -e... /usr/bin/grep
- checking for egrep... /usr/bin/grep -E
- checking for sched.h... yes
- checking for cc options needed to detect all undeclared functions... -fno-builtin
- checking whether sched_setaffinity is declared... yes
- checking for mach/thread_policy.h... no
- checking whether thread_policy_set is declared... no
- configure: creating ./config.status
- config.status: creating src/config.h
Processing 75/95: [batteries: dune build] [cpu: dune build] [ppxlib: dune build] [pyml: dune build]
+ /home/opam/.opam/5.3.0/bin/dune "build" "-p" "cpu" "-j" "39" (CWD=/home/opam/.opam/5.3.0/.opam-switch/build/cpu.2.0.0)
-> compiled cpu.2.0.0
Processing 75/95: [batteries: dune build] [ppxlib: dune build] [pyml: dune build]
-> installed cpu.2.0.0
Processing 76/95: [batteries: dune build] [ppxlib: dune build] [pyml: dune build]
Processing 77/95: [batteries: dune build] [parany: dune build] [ppxlib: dune build] [pyml: dune build]
+ /home/opam/.opam/5.3.0/bin/dune "build" "-p" "parany" "-j" "39" (CWD=/home/opam/.opam/5.3.0/.opam-switch/build/parany.14.0.1)
-> compiled parany.14.0.1
Processing 77/95: [batteries: dune build] [ppxlib: dune build] [pyml: dune build]
-> installed parany.14.0.1
Processing 78/95: [batteries: dune build] [ppxlib: dune build] [pyml: dune build]
+ /home/opam/.opam/5.3.0/bin/dune "build" "-p" "pyml" "-j" "39" "@install" (CWD=/home/opam/.opam/5.3.0/.opam-switch/build/pyml.20250807)
-> compiled pyml.20250807
Processing 78/95: [batteries: dune build] [ppxlib: dune build]
-> installed pyml.20250807
Processing 79/95: [batteries: dune build] [ppxlib: dune build]
+ /home/opam/.opam/5.3.0/bin/dune "build" "-p" "batteries" "-j" "39" "@install" (CWD=/home/opam/.opam/5.3.0/.opam-switch/build/batteries.3.9.0)
-> compiled batteries.3.9.0
Processing 79/95: [ppxlib: dune build]
-> installed batteries.3.9.0
Processing 80/95: [ppxlib: dune build]
Processing 81/95: [bst: dune build] [ppxlib: dune build]
Processing 82/95: [bst: dune build] [cpm: dune build] [ppxlib: dune build]
Processing 83/95: [bst: dune build] [cpm: dune build] [line_oriented: dune build] [ppxlib: dune build]
+ /home/opam/.opam/5.3.0/bin/dune "build" "-p" "line_oriented" "-j" "39" (CWD=/home/opam/.opam/5.3.0/.opam-switch/build/line_oriented.1.3.0)
-> compiled line_oriented.1.3.0
Processing 83/95: [bst: dune build] [cpm: dune build] [ppxlib: dune build]
-> installed line_oriented.1.3.0
Processing 84/95: [bst: dune build] [cpm: dune build] [ppxlib: dune build]
+ /home/opam/.opam/5.3.0/bin/dune "build" "-p" "cpm" "-j" "39" (CWD=/home/opam/.opam/5.3.0/.opam-switch/build/cpm.12.2.0)
-> compiled cpm.12.2.0
Processing 84/95: [bst: dune build] [ppxlib: dune build]
-> installed cpm.12.2.0
Processing 85/95: [bst: dune build] [ppxlib: dune build]
+ /home/opam/.opam/5.3.0/bin/dune "build" "-p" "bst" "-j" "39" (CWD=/home/opam/.opam/5.3.0/.opam-switch/build/bst.7.1.0)
-> compiled bst.7.1.0
Processing 85/95: [ppxlib: dune build]
-> installed bst.7.1.0
Processing 86/95: [ppxlib: dune build]
+ /home/opam/.opam/5.3.0/bin/dune "build" "-p" "ppxlib" "-j" "39" "@install" (CWD=/home/opam/.opam/5.3.0/.opam-switch/build/ppxlib.0.37.0~5.4preview)
-> compiled ppxlib.0.37.0~5.4preview
-> installed ppxlib.0.37.0~5.4preview
Processing 88/95: [extunix: dune build]
+ /home/opam/.opam/5.3.0/bin/dune "build" "-p" "extunix" "-j" "39" "@install" (CWD=/home/opam/.opam/5.3.0/.opam-switch/build/extunix.0.4.4)
- (cd _build/default/src && ../discover/discover.exe)
- checking EVENTFD.............ok
- checking ATFILE..............ok
- checking RENAMEAT2...........failed
- checking RENAME_WHITEOUT.....failed
- checking DIRFD...............ok
- checking STATVFS.............ok
- checking FSTATVFS............ok
- checking SIOCGIFCONF.........failed
- checking IFADDRS.............ok
- checking INET_NTOA...........ok
- checking INET_NTOP...........ok
- checking UNAME...............ok
- checking FADVISE.............failed
- checking FALLOCATE...........failed
- checking TTY_IOCTL...........failed
- checking TTYNAME.............ok
- checking CTERMID.............ok
- checking GETTID..............failed
- checking PGID................ok
- checking SETREUID............ok
- checking FSYNC...............ok
- checking FDATASYNC...........ok
- checking SYNC................ok
- checking SYNCFS..............failed
- checking REALPATH............ok
- checking SIGNALFD............failed
- checking PTRACE..............failed
- checking RESOURCE............ok
- checking MLOCKALL............ok
- checking STRPTIME............ok
- checking STRTIME.............ok
- checking TIMEZONE............failed
- checking TIMEGM..............failed
- checking PTS.................ok
- checking FCNTL...............ok
- checking TCPGRP..............ok
- checking EXECINFO............ok
- checking SETENV..............ok
- checking CLEARENV............failed
- checking MKDTEMP.............ok
- checking MALLOC_INFO.........failed
- checking MALLOC_STATS........failed
- checking MEMALIGN............ok
- checking ENDIAN..............ok
- checking READ_CREDENTIALS....failed
- checking FEXECVE.............ok
- checking SENDMSG.............failed
- checking PREAD...............ok
- checking PWRITE..............ok
- checking READ................ok
- checking WRITE...............ok
- checking MKSTEMPS............failed
- checking MKOSTEMPS...........failed
- checking SETRESUID...........failed
- checking SYSCONF.............ok
- checking SPLICE..............failed
- checking TEE.................failed
- checking VMSPLICE............failed
- checking SOCKOPT.............ok
- checking TCP_KEEPIDLE........failed
- checking TCP_KEEPCNT.........failed
- checking TCP_KEEPINTVL.......failed
- checking SO_REUSEPORT........failed
- checking POLL................ok
- checking SYSINFO.............failed
- checking MCHECK..............failed
- checking MOUNT...............failed
- checking UNSHARE.............failed
- checking CHROOT..............failed
- checking SYSLOG..............ok
- checking WAIT4...............failed
-> compiled extunix.0.4.4
-> installed extunix.0.4.4
Processing 90/95: [dokeysto: dune build]
+ /home/opam/.opam/5.3.0/bin/dune "build" "-p" "dokeysto" "-j" "39" (CWD=/home/opam/.opam/5.3.0/.opam-switch/build/dokeysto.4.0.1)
-> compiled dokeysto.4.0.1
-> installed dokeysto.4.0.1
Processing 92/95: [molenc: dune build]
+ /home/opam/.opam/5.3.0/bin/dune "build" "-p" "molenc" "-j" "39" (CWD=/home/opam/.opam/5.3.0/.opam-switch/build/molenc.17.0.1)
-> compiled molenc.17.0.1
Processing 93/95: [molenc: cp]
+ /bin/cp "bin/molenc_diam.py" "/home/opam/.opam/5.3.0/bin/molenc_diam.py" (CWD=/home/opam/.opam/5.3.0/.opam-switch/build/molenc.17.0.1)
+ /bin/cp "bin/molenc_ph4.py" "/home/opam/.opam/5.3.0/bin/molenc_ph4.py" (CWD=/home/opam/.opam/5.3.0/.opam-switch/build/molenc.17.0.1)
+ /bin/cp "bin/molenc.sh" "/home/opam/.opam/5.3.0/bin/molenc.sh" (CWD=/home/opam/.opam/5.3.0/.opam-switch/build/molenc.17.0.1)
+ /bin/cp "bin/molenc_ligprep.sh" "/home/opam/.opam/5.3.0/bin/molenc_ligprep.sh" (CWD=/home/opam/.opam/5.3.0/.opam-switch/build/molenc.17.0.1)
+ /bin/cp "bin/molenc_common.py" "/home/opam/.opam/5.3.0/bin/molenc_common.py" (CWD=/home/opam/.opam/5.3.0/.opam-switch/build/molenc.17.0.1)
+ /bin/cp "bin/molenc_lean.py" "/home/opam/.opam/5.3.0/bin/molenc_lean.py" (CWD=/home/opam/.opam/5.3.0/.opam-switch/build/molenc.17.0.1)
+ /bin/cp "bin/molenc_lizard.py" "/home/opam/.opam/5.3.0/bin/molenc_lizard.py" (CWD=/home/opam/.opam/5.3.0/.opam-switch/build/molenc.17.0.1)
+ /bin/cp "bin/molenc_scan.py" "/home/opam/.opam/5.3.0/bin/molenc_scan.py" (CWD=/home/opam/.opam/5.3.0/.opam-switch/build/molenc.17.0.1)
+ /bin/cp "bin/molenc_scan.sh" "/home/opam/.opam/5.3.0/bin/molenc_scan.sh" (CWD=/home/opam/.opam/5.3.0/.opam-switch/build/molenc.17.0.1)
+ /bin/cp "bin/molenc_type_atoms.py" "/home/opam/.opam/5.3.0/bin/molenc_type_atoms.py" (CWD=/home/opam/.opam/5.3.0/.opam-switch/build/molenc.17.0.1)
+ /bin/cp "bin/smi2png.py" "/home/opam/.opam/5.3.0/bin/molenc_smi2png.py" (CWD=/home/opam/.opam/5.3.0/.opam-switch/build/molenc.17.0.1)
+ /bin/cp "bin/molenc_smisur.py" "/home/opam/.opam/5.3.0/bin/molenc_smisur.py" (CWD=/home/opam/.opam/5.3.0/.opam-switch/build/molenc.17.0.1)
+ /bin/cp "bin/molenc_panascan.py" "/home/opam/.opam/5.3.0/bin/molenc_panascan.py" (CWD=/home/opam/.opam/5.3.0/.opam-switch/build/molenc.17.0.1)
+ /bin/cp "bin/molenc_scaffold.py" "/home/opam/.opam/5.3.0/bin/molenc_scaffold.py" (CWD=/home/opam/.opam/5.3.0/.opam-switch/build/molenc.17.0.1)
+ /bin/cp "bin/molenc_deepsmi.py" "/home/opam/.opam/5.3.0/bin/molenc_deepsmi.py" (CWD=/home/opam/.opam/5.3.0/.opam-switch/build/molenc.17.0.1)
+ /bin/cp "bin/molenc_lead.py" "/home/opam/.opam/5.3.0/bin/molenc_lead.py" (CWD=/home/opam/.opam/5.3.0/.opam-switch/build/molenc.17.0.1)
+ /bin/cp "bin/molenc_drug.py" "/home/opam/.opam/5.3.0/bin/molenc_drug.py" (CWD=/home/opam/.opam/5.3.0/.opam-switch/build/molenc.17.0.1)
+ /bin/cp "bin/molenc_smi2cansmi.py" "/home/opam/.opam/5.3.0/bin/molenc_smi2cansmi.py" (CWD=/home/opam/.opam/5.3.0/.opam-switch/build/molenc.17.0.1)
+ /bin/cp "bin/molenc_std.py" "/home/opam/.opam/5.3.0/bin/molenc_std.py" (CWD=/home/opam/.opam/5.3.0/.opam-switch/build/molenc.17.0.1)
+ /bin/cp "bin/molenc_padel.py" "/home/opam/.opam/5.3.0/bin/molenc_padel.py" (CWD=/home/opam/.opam/5.3.0/.opam-switch/build/molenc.17.0.1)
+ /bin/cp "bin/molenc_rotbond.py" "/home/opam/.opam/5.3.0/bin/molenc_rotbond.py" (CWD=/home/opam/.opam/5.3.0/.opam-switch/build/molenc.17.0.1)
+ /bin/cp "bin/molenc_mview.py" "/home/opam/.opam/5.3.0/bin/molenc_mview.py" (CWD=/home/opam/.opam/5.3.0/.opam-switch/build/molenc.17.0.1)
+ /bin/cp "bin/molenc_HA.py" "/home/opam/.opam/5.3.0/bin/molenc_HA.py" (CWD=/home/opam/.opam/5.3.0/.opam-switch/build/molenc.17.0.1)
+ /bin/cp "bin/molenc_sdf2smi.py" "/home/opam/.opam/5.3.0/bin/molenc_sdf2smi.py" (CWD=/home/opam/.opam/5.3.0/.opam-switch/build/molenc.17.0.1)
+ /bin/cp "bin/molenc_atoms_filter.py" "/home/opam/.opam/5.3.0/bin/molenc_atoms_filter.py" (CWD=/home/opam/.opam/5.3.0/.opam-switch/build/molenc.17.0.1)
+ /bin/cp "bin/molenc_gpr.py" "/home/opam/.opam/5.3.0/bin/molenc_gpr.py" (CWD=/home/opam/.opam/5.3.0/.opam-switch/build/molenc.17.0.1)
+ /bin/cp "bin/molenc_stable.py" "/home/opam/.opam/5.3.0/bin/molenc_stable.py" (CWD=/home/opam/.opam/5.3.0/.opam-switch/build/molenc.17.0.1)
+ /bin/cp "bin/molenc_thash.py" "/home/opam/.opam/5.3.0/bin/molenc_thash.py" (CWD=/home/opam/.opam/5.3.0/.opam-switch/build/molenc.17.0.1)
+ /bin/cp "bin/molenc_SA.py" "/home/opam/.opam/5.3.0/bin/molenc_SA.py" (CWD=/home/opam/.opam/5.3.0/.opam-switch/build/molenc.17.0.1)
+ /bin/cp "bin/fpscores.pkl.gz" "/home/opam/.opam/5.3.0/bin/fpscores.pkl.gz" (CWD=/home/opam/.opam/5.3.0/.opam-switch/build/molenc.17.0.1)
-> installed molenc.17.0.1
Processing 94/95: [orf: dune build]
+ /home/opam/.opam/5.3.0/bin/dune "build" "-p" "orf" "-j" "39" (CWD=/home/opam/.opam/5.3.0/.opam-switch/build/orf.1.0.1)
-> compiled orf.1.0.1
-> installed orf.1.0.1
Done.
2025-08-23 20:26.55 ---> saved as "3810e25ca8b5ac68763375fe62f6d4e58d83d68829e2ce8794ee448c07c2ad40"
Job succeeded
Home|Differences with the last checks|Previous runs