Building on rosemary
(from freebsd)
2025-06-19 19:59.22 ---> using "77d5fe31836124b4684d554707425c4fde23f9ef3df0a804431a47419573778d" from cache
/: (user (uid 1000) (gid 1000))
/: (env OPAMPRECISETRACKING 1)
/: (env OPAMUTF8 never)
/: (env OPAMEXTERNALSOLVER builtin-0install)
/: (env OPAMCRITERIA +removed)
/: (env CI true)
/: (env OPAM_HEALTH_CHECK_CI true)
/: (run (shell "sudo ln -f /usr/local/bin/opam-dev /usr/local/bin/opam"))
2025-06-19 19:59.22 ---> using "7afea9128a2830beedf345f0b46af5484579ebada7710165f445c6c5b18563a9" from cache
/: (run (network host)
(shell "rm -rf ~/opam-repository && git clone -q 'https://github.com/ocaml/opam-repository' ~/opam-repository && git -C ~/opam-repository checkout -q e87127a46b6e17aa7aea2b54b5dac3249ff8d68f"))
2025-06-19 19:59.22 ---> using "1a82afcea8f3b2e50b27c04125d56bd26d164947461382b361473640c4461705" from cache
/: (run (shell "rm -rf ~/.opam && opam init -ya --bare ~/opam-repository"))
No configuration file found, using built-in defaults.
Checking for available remotes: rsync and local, git.
- you won't be able to use mercurial repositories unless you install the hg command on your system.
- you won't be able to use darcs repositories unless you install the darcs command on your system.
<><> Fetching repository information ><><><><><><><><><><><><><><><><><><><><><>
[default] Initialised
User configuration:
~/.profile is already up-to-date.
[NOTE] Make sure that ~/.profile is well sourced in your ~/.bashrc.
2025-06-19 19:59.22 ---> using "19dd8055c88225d8b0ad155deba0ac9da81af0d0666c4540aed3415dbfce7771" from cache
/: (run (cache (opam-archives (target /home/opam/.opam/download-cache)))
(network host)
(shell "opam switch create --repositories=default '4.14.2' 'ocaml-base-compiler.4.14.2'"))
<><> Installing new switch packages <><><><><><><><><><><><><><><><><><><><><><>
Switch invariant: ["ocaml-base-compiler" {= "4.14.2"}]
<><> Processing actions <><><><><><><><><><><><><><><><><><><><><><><><><><><><>
-> retrieved ocaml-config.2 (cached)
-> installed base-bigarray.base
-> installed base-threads.base
-> installed base-unix.base
-> installed ocaml-options-vanilla.1
-> retrieved ocaml-base-compiler.4.14.2 (cached)
-> installed ocaml-base-compiler.4.14.2
-> installed ocaml-config.2
-> installed ocaml.4.14.2
Done.
# To update the current shell environment, run: eval $(opam env --switch=4.14.2)
2025-06-19 19:59.23 ---> using "361928e35ea79f87ace971d130db83ed73db0918e25a98c35791a63490b43dd6" from cache
/: (run (network host)
(shell "opam update --depexts"))
[WARNING] Unknown update command for bsd, skipping system update
2025-06-19 19:59.23 ---> using "2ff2b9dad356881c4a922285d38cc59ff86430d4a1cfeec1653c16a21363c0bf" from cache
/: (run (cache (opam-archives (target /home/opam/.opam/download-cache)))
(network host)
(shell "opam remove -y linwrap.9.1.4\
\nopam install -vy linwrap.9.1.4\
\nres=$?\
\nif [ $res = 31 ]; then\
\n if opam show -f x-ci-accept-failures: linwrap.9.1.4 | grep -q 'freebsd'; then\
\n echo \"This package failed and has been disabled for CI using the 'x-ci-accept-failures' field.\"\
\n exit 69\
\n fi\
\nfi \
\n\
\n\
\nexit $res"))
[NOTE] linwrap.9.1.4 is not installed.
Nothing to do.
The following actions will be performed:
=== install 43 packages
- install base-bytes base [required by dokeysto]
- install batteries 3.9.0 [required by linwrap]
- install bst 7.1.0 [required by linwrap]
- install camlp-streams 5.0.1 [required by batteries]
- install camltc 0.9.8 [required by dokeysto_camltc]
- install conf-autoconf 0.2 [required by cpu, stdcompat]
- install conf-bash 1 [required by camltc]
- install conf-graphviz 0.1 [required by molenc]
- install conf-liblinear-tools 1.0.0 [required by linwrap]
- install conf-python-3 9.0.0 [required by linwrap]
- install conf-rdkit 1 [required by linwrap]
- install conf-which 1 [required by conf-liblinear-tools]
- install cpm 12.2.0 [required by linwrap]
- install cppo 1.8.0 [required by lwt]
- install cpu 2.0.0 [required by parany]
- install csexp 1.5.2 [required by dune-configurator]
- install dokeysto 4.0.1 [required by dokeysto_camltc]
- install dokeysto_camltc 4.0.0 [required by linwrap]
- install dolog 6.0.0 [required by linwrap]
- install dune 3.19.1 [required by linwrap]
- install dune-configurator 3.19.1 [required by extunix]
- install extunix 0.4.4 [required by dokeysto]
- install line_oriented 1.3.0 [required by molenc]
- install linwrap 9.1.4
- install logs 0.8.0 [required by camltc]
- install lwt 5.9.1 [required by camltc]
- install minicli 5.0.2 [required by linwrap]
- install molenc 16.13.0 [required by linwrap]
- install num 1.6 [required by batteries]
- install ocaml-compiler-libs v0.12.4 [required by ppxlib]
- install ocamlbuild 0.16.1 [required by logs]
- install ocamlfind 1.9.8 [required by batteries]
- install ocamlgraph 2.2.0 [required by molenc]
- install ocplib-endian 1.2 [required by lwt]
- install parany 14.0.1 [required by linwrap]
- install ppx_derivers 1.2.1 [required by ppxlib]
- install ppxlib 0.37.0~5.4preview [required by extunix]
- install pyml 20231101 [required by molenc]
- install sexplib0 v0.17.0 [required by ppxlib]
- install stdcompat 20.1 [required by pyml]
- install stdlib-shims 0.3.0 [required by ppxlib]
- install topkg 1.0.8 [required by logs]
- install vector3 1.0.0 [required by molenc]
The following system packages will first need to be installed:
autoconf graphics/graphviz liblinear python3 rdkit
<><> Handling external dependencies <><><><><><><><><><><><><><><><><><><><><><>
opam believes some required external dependencies are missing. opam can:
> 1. Run pkg to install them (may need root/sudo access)
2. Display the recommended pkg command and wait while you run it manually (e.g. in another terminal)
3. Continue anyway, and, upon success, permanently register that this external dependency is present, but not detectable
4. Abort the installation
[1/2/3/4] 1
+ /usr/local/bin/sudo "pkg" "install" "-y" "autoconf" "graphics/graphviz" "liblinear" "python3" "rdkit"
- Updating FreeBSD repository catalogue...
- [rosemary] Fetching data.pkg:
- .
- .
- .
- ..
- ..
- ..
- . done
- Processing entries:
- ...
- ...
- ..
- .
- . done
- FreeBSD repository update completed. 35990 packages processed.
- All repositories are up to date.
- The following 101 package(s) will be affected (of 0 checked):
-
- New packages to be INSTALLED:
- adobe-cmaps: 20051217_4
- autoconf: 2.72
- autoconf-switch: 20220527
- binutils: 2.44,1
- boost-libs: 1.87.0_1
- cairo: 1.18.2,3
- coordgenlibs: 3.0.2
- fontconfig: 2.15.0_3,1
- freetype2: 2.13.3
- fribidi: 1.0.16
- gcc13: 13.3.0_2
- giflib: 5.2.2
- glib: 2.80.5_1,2
- gmp: 6.3.0
- graphite2: 1.3.14
- graphviz: 12.2.1_1
- harfbuzz: 10.3.0
- icu: 76.1,1
- jbigkit: 2.1_3
- jpeg-turbo: 3.1.0
- lcms2: 2.17
- lerc: 4.0.0
- libICE: 1.1.1,1
- libSM: 1.2.6,1
- libX11: 1.8.12,1
- libXScrnSaver: 1.2.4_1
- libXau: 1.0.11
- libXaw: 1.0.16,2
- libXdmcp: 1.1.5
- libXext: 1.3.6,1
- libXft: 2.3.8
- libXmu: 1.1.4,1
- libXpm: 3.5.17_1
- libXrender: 0.9.12
- libXt: 1.3.0,1
- libdatrie: 0.2.13_2
- libdeflate: 1.22
- libfontenc: 1.1.8
- libgcrypt: 1.11.0
- libgd: 2.3.3_13,1
- libgpg-error: 1.51
- libimagequant: 4.3.4_1
- liblinear: 2.48
- libltdl: 2.5.4
- libraqm: 0.10.2
- libthai: 0.1.29_1
- libxcb: 1.17.0
- libxml2: 2.11.9
- libxslt: 1.1.43
- lzo2: 2.10_1
- m4: 1.4.19_1,1
- maeparser: 1.3.2
- mkfontscale: 1.2.3
- mpc: 1.3.1_1
- mpfr: 4.2.2,1
- openblas: 0.3.29_1,2
- openjpeg: 2.5.3
- pango: 1.56.1
- pixman: 0.44.2
- png: 1.6.47
- py311-appdirs: 1.4.4_1
- py311-boost-libs: 1.87.0
- py311-brotli: 1.1.0
- py311-certifi: 2025.1.31
- py311-contourpy: 1.3.1
- py311-cycler: 0.12.1
- py311-fonttools: 4.56.0
- py311-fs2: 2.4.16_1
- py311-importlib-resources: 6.5.2
- py311-kiwisolver: 1.4.8,1
- py311-lxml: 4.9.3_1
- py311-matplotlib: 3.8.0_1
- py311-numpy: 1.26.4_6,1
- py311-olefile: 0.46_1
- py311-packaging: 24.2
- py311-pillow: 11.0.0
- py311-pluggy: 1.5.0
- py311-pyparsing: 3.2.1
- py311-python-dateutil: 2.9.0
- py311-pytz: 2024.2_1,1
- py311-reportlab: 4.3.1
- py311-six: 1.17.0
- py311-tkinter: 3.11.12_10
- py311-tornado: 6.4
- py311-unicodedata2: 16.0.0
- py311-zopfli: 0.2.3
- python3: 3_4
- qhull: 8.0.2_3,1
- rdkit: 2024.09.4_1
- suitesparse-amd: 3.3.3
- suitesparse-camd: 3.3.3
- suitesparse-ccolamd: 3.3.4
- suitesparse-cholmod: 5.3.1
- suitesparse-colamd: 3.3.4
- suitesparse-config: 7.10.1
- suitesparse-umfpack: 6.3.5_1
- tcl86: 8.6.16_2
- tiff: 4.7.0
- tk86: 8.6.16
- webp: 1.5.0
- xorgproto: 2024.1
-
- Number of packages to be installed: 101
-
- The process will require 1 GiB more space.
- 239 MiB to be downloaded.
- [rosemary] [1/101] Fetching png-1.6.47.pkg: ..
- ........ done
- [rosemary] [2/101] Fetching qhull-8.0.2_3,1.pkg: .......... done
- [rosemary] [3/101] Fetching libxcb-1.17.0.pkg: ....
- ...... done
- [rosemary] [4/101] Fetching libdatrie-0.2.13_2.pkg: ... done
- [rosemary] [5/101] Fetching libraqm-0.10.2.pkg: ... done
- [rosemary] [6/101] Fetching freetype2-2.13.3.pkg: .......
- ... done
- [rosemary] [7/101] Fetching jpeg-turbo-3.1.0.pkg: .......... done
- [rosemary] [8/101] Fetching libXt-1.3.0,1.pkg: .......... done
- [rosemary] [9/101] Fetching suitesparse-camd-3.3.3.pkg: .......... done
- [rosemary] [10/101] Fetching py311-pluggy-1.5.0.pkg: ... done
- [rosemary] [11/101] Fetching libxslt-1.1.43.pkg: .......... done
- [rosemary] [12/101] Fetching boost-libs-1.87.0_1.pkg:
- .
- .
- .
- .
- .
- .
- .
- .
- .
- . done
- [rosemary] [13/101] Fetching py311-numpy-1.26.4_6,1.pkg:
- .
- .
- .
- .
- .
- .
- .
- .
- .
- . done
- [rosemary] [14/101] Fetching py311-python-dateutil-2.9.0.pkg: .
- ......... done
- [rosemary] [15/101] Fetching lzo2-2.10_1.pkg: ........ done
- [rosemary] [16/101] Fetching py311-six-1.17.0.pkg: .. done
- [rosemary] [17/101] Fetching lcms2-2.17.pkg: ..
- ...
- ...
- .. done
- [rosemary] [18/101] Fetching py311-appdirs-1.4.4_1.pkg: . done
- [rosemary] [19/101] Fetching libXaw-1.0.16,2.pkg:
- .......... done
- pkg: An error occured while fetching package: Unknown error
- pkg: An error occured while fetching package: Unknown error
[ERROR] System package install failed with exit code 3 at command:
sudo pkg install -y autoconf graphics/graphviz liblinear python3 rdkit
[ERROR] These packages are still missing: autoconf graphics/graphviz liblinear python3 rdkit
[NOTE] You can retry with '--assume-depexts' to skip this check, or run 'opam option depext=false' to permanently disable handling of system packages.
'opam install -vy linwrap.9.1.4' failed.
jail: /usr/bin/su -l opam -c cd '/' && env OPAM_HEALTH_CHECK_CI='true' CI='true' OPAMCRITERIA='+removed' OPAMEXTERNALSOLVER='builtin-0install' OPAMUTF8='never' OPAMPRECISETRACKING='1' '/usr/bin/env' 'bash' '-c' 'opam remove -y linwrap.9.1.4
opam install -vy linwrap.9.1.4
res=$?
if [ $res = 31 ]; then
if opam show -f x-ci-accept-failures: linwrap.9.1.4 | grep -q '\''freebsd'\''; then
echo "This package failed and has been disabled for CI using the '\''x-ci-accept-failures'\'' field."
exit 69
fi
fi
exit $res': failed
"jail" "-c" "name=obuilder_11788_57802" "mount.fstab=/tmp/obuilder-jail-eeae70/fstab" "mount.devfs" "path=/obuilder/result/06ee79783a371550e690369a10472d20b84f0d5091511a58bc13744aae4327cf/rootfs" "host=inherit" "ip6=inherit" "ip4=inherit" "command=/usr/bin/su" "-l" "opam" "-c" "cd '/' && env OPAM_HEALTH_CHECK_CI='true' CI='true' OPAMCRITERIA='+removed' OPAMEXTERNALSOLVER='builtin-0install' OPAMUTF8='never' OPAMPRECISETRACKING='1' '/usr/bin/env' 'bash' '-c' 'opam remove -y linwrap.9.1.4
opam install -vy linwrap.9.1.4
res=$?
if [ $res = 31 ]; then
if opam show -f x-ci-accept-failures: linwrap.9.1.4 | grep -q '\''freebsd'\''; then
echo "This package failed and has been disabled for CI using the '\''x-ci-accept-failures'\'' field."
exit 69
fi
fi
exit $res'" failed with exit status 1
Failed: Build failed
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