Building on spring
(from freebsd)
2024-02-07 11:30.56 ---> using "77d5fe31836124b4684d554707425c4fde23f9ef3df0a804431a47419573778d" from cache
/: (user (uid 1000) (gid 1000))
/: (env OPAMPRECISETRACKING 1)
/: (env OPAMUTF8 never)
/: (env OPAMEXTERNALSOLVER builtin-0install)
/: (env OPAMCRITERIA +removed)
/: (run (shell "sudo ln -f /usr/local/bin/opam-dev /usr/local/bin/opam"))
2024-02-07 11:30.56 ---> using "a2b22593046b56fadc85e22b0da7b84e903c1f5aa4d42a7c481121ceec28b31f" from cache
/: (run (network host)
(shell "rm -rf ~/opam-repository && git clone -q 'https://github.com/ocaml/opam-repository' ~/opam-repository && git -C ~/opam-repository checkout -q 57d79cbb0e12030bd34336c141270a2ff1d98405"))
2024-02-07 11:30.56 ---> using "e26181d21da2f2cdd984c5e5bd7bde0bf6bedcb7d03e87a845b7f4534f035ed0" from cache
/: (run (shell "rm -rf ~/.opam && opam init -ya --bare ~/opam-repository"))
No configuration file found, using built-in defaults.
Checking for available remotes: rsync and local, git.
- you won't be able to use mercurial repositories unless you install the hg command on your system.
- you won't be able to use darcs repositories unless you install the darcs command on your system.
<><> Fetching repository information ><><><><><><><><><><><><><><><><><><><><><>
[default] Initialised
User configuration:
/usr/home/opam/.profile is already up-to-date.
[NOTE] Make sure that /usr/home/opam/.profile is well sourced in your ~/.bashrc.
2024-02-07 11:30.57 ---> using "ad3bd61fc153d53ece88f021644275aa58f7347c349c401d3998a46aa6b41ecf" from cache
/: (run (cache (opam-archives (target /usr/home/opam/.opam/download-cache)))
(network host)
(shell "opam switch create --repositories=default '5.1.0' 'ocaml-base-compiler.5.1.0'"))
<><> Installing new switch packages <><><><><><><><><><><><><><><><><><><><><><>
Switch invariant: ["ocaml-base-compiler" {= "5.1.0"}]
<><> Processing actions <><><><><><><><><><><><><><><><><><><><><><><><><><><><>
-> installed base-bigarray.base
-> installed base-threads.base
-> installed base-unix.base
-> installed ocaml-options-vanilla.1
-> retrieved ocaml-base-compiler.5.1.0 (cached)
-> installed ocaml-base-compiler.5.1.0
-> installed ocaml-config.3
-> installed ocaml.5.1.0
-> installed base-domains.base
-> installed base-nnp.base
Done.
# Run eval $(opam env --switch=5.1.0) to update the current shell environment
2024-02-07 11:30.57 ---> using "3862348b28bf42451dc5b37eb112f587741781293a6bb654d1ac6685a4b57e05" from cache
/: (run (network host)
(shell "opam update --depexts"))
[WARNING] Unknown update command for bsd, skipping system update
2024-02-07 11:30.57 ---> using "1f7585542b71e9a3d6ce6ee98f3d008e80f2a23f7da3ecf2a546e19d17129d64" from cache
/: (env OCAMLPARAM warn-error=+8,_)
/: (run (cache (opam-archives (target /usr/home/opam/.opam/download-cache)))
(network host)
(shell "\
\nopam remove -y \"svmwrap.5.1.1\"\
\nopam install -vy \"svmwrap.5.1.1\"\
\nres=$?\
\nif [ $res = 31 ]; then\
\n if opam show -f x-ci-accept-failures: \"svmwrap.5.1.1\" | grep -q '\"freebsd\"'; then\
\n echo \"This package failed and has been disabled for CI using the 'x-ci-accept-failures' field.\"\
\n exit 69\
\n fi\
\nfi\
\n\
\n\
\nexit $res\
\n"))
[NOTE] svmwrap.5.1.1 is not installed.
Nothing to do.
The following actions will be performed:
=== install 37 packages
- install base-bytes base [required by dokeysto]
- install batteries 3.7.2 [required by svmwrap]
- install bst 7.0.1 [required by molenc]
- install camlp-streams 5.0.1 [required by batteries]
- install conf-autoconf 0.1 [required by cpu, stdcompat]
- install conf-graphviz 0.1 [required by molenc]
- install conf-libsvm-tools 1.0.0 [required by svmwrap]
- install conf-nlopt 1 [required by nlopt]
- install conf-pkg-config 3 [required by conf-nlopt]
- install conf-python-3 9.0.0 [required by molenc]
- install conf-rdkit 1 [required by molenc]
- install conf-which 1 [required by conf-graphviz]
- install cpm 12.2.0 [required by svmwrap]
- install cpu 2.0.0 [required by parany]
- install csexp 1.5.2 [required by dune-configurator]
- install dokeysto 4.0.1 [required by svmwrap]
- install dolog 6.0.0 [required by svmwrap]
- install dune 3.13.1 [required by svmwrap]
- install dune-configurator 3.13.1 [required by extunix]
- install extunix 0.4.1 [required by dokeysto]
- install line_oriented 1.3.0 [required by svmwrap]
- install minicli 5.0.2 [required by svmwrap]
- install molenc 16.23.0 [required by svmwrap]
- install nlopt 0.7.0 [required by svmwrap]
- install num 1.5 [required by batteries]
- install ocaml-compiler-libs v0.12.4 [required by ppxlib]
- install ocamlfind 1.9.6 [required by batteries]
- install ocamlgraph 2.1.0 [required by molenc]
- install parany 14.0.1 [required by svmwrap]
- install ppx_derivers 1.2.1 [required by ppxlib]
- install ppxlib 0.31.0 [required by extunix]
- install pyml 20231101 [required by molenc]
- install sexplib0 v0.16.0 [required by ppxlib]
- install stdcompat 19 [required by pyml]
- install stdlib-shims 0.3.0 [required by ocamlgraph]
- install svmwrap 5.1.1
- install vector3 1.0.0 [required by molenc]
The following system packages will first need to be installed:
autoconf graphics/graphviz nlopt python3 rdkit
<><> Handling external dependencies <><><><><><><><><><><><><><><><><><><><><><>
opam believes some required external dependencies are missing. opam can:
> 1. Run pkg to install them (may need root/sudo access)
2. Display the recommended pkg command and wait while you run it manually (e.g. in another terminal)
3. Continue anyway, and, upon success, permanently register that this external dependency is present, but not detectable
4. Abort the installation
[1/2/3/4] 1
+ /usr/local/bin/sudo "pkg" "install" "-y" "autoconf" "graphics/graphviz" "nlopt" "python3" "rdkit"
- Updating FreeBSD repository catalogue...
- [spring] Fetching packagesite.pkg: ..
- ...
- ...
- .. done
- Processing entries: .
- .
- ..
- ..
- .
- ..
- . done
- FreeBSD repository update completed. 33764 packages processed.
- All repositories are up to date.
- The following 113 package(s) will be affected (of 0 checked):
-
- New packages to be INSTALLED:
- adobe-cmaps: 20051217_4
- autoconf: 2.71
- autoconf-switch: 20220527
- binutils: 2.40_4,1
- boehm-gc: 8.2.4
- boehm-gc-threaded: 8.2.4
- boost-libs: 1.83.0_1
- brotli: 1.1.0,1
- cairo: 1.17.4_2,3
- coordgenlibs: 3.0.2
- dejavu: 2.37_3
- encodings: 1.0.5,1
- font-bh-ttf: 1.0.3_5
- font-misc-ethiopic: 1.0.4
- font-misc-meltho: 1.0.3_5
- fontconfig: 2.14.2,1
- freetype2: 2.13.2
- fribidi: 1.0.13
- gcc12: 12.2.0_7
- giflib: 5.2.1
- glib: 2.78.3,2
- gmp: 6.3.0
- graphite2: 1.3.14
- graphviz: 9.0.0_1
- guile-aclocal: 3.0.9_1
- guile2: 2.2.7_5
- harfbuzz: 8.3.0
- icu: 74.2,1
- jbigkit: 2.1_1
- jpeg-turbo: 3.0.1
- lcms2: 2.16
- libICE: 1.1.0_2,1
- libSM: 1.2.3_1,1
- libX11: 1.8.7,1
- libXScrnSaver: 1.2.4
- libXau: 1.0.9
- libXaw: 1.0.14,2
- libXdmcp: 1.1.3
- libXext: 1.3.4,1
- libXft: 2.3.7
- libXmu: 1.1.4,1
- libXpm: 3.5.17
- libXrender: 0.9.10_2
- libXt: 1.2.1,1
- libdatrie: 0.2.13_1
- libdeflate: 1.19
- libfontenc: 1.1.7
- libgcrypt: 1.10.3
- libgd: 2.3.3_9,1
- libglvnd: 1.7.0
- libgpg-error: 1.47
- libimagequant: 4.2.2_2
- libltdl: 2.4.7
- libraqm: 0.10.1
- libthai: 0.1.29
- libxcb: 1.15_1
- libxml2: 2.10.4_2
- libxslt: 1.1.37
- m4: 1.4.19,1
- maeparser: 1.3.1_2
- mkfontscale: 1.2.1
- mpc: 1.3.1_1
- mpfr: 4.2.1,1
- nlopt: 2.7.1_2
- openblas: 0.3.25,2
- openjpeg: 2.5.0_1
- pango: 1.50.14
- pixman: 0.42.2
- png: 1.6.40
- py39-appdirs: 1.4.4
- py39-boost-libs: 1.83.0
- py39-brotli: 1.1.0
- py39-certifi: 2023.11.17
- py39-contourpy: 1.2.0
- py39-cycler: 0.12.1
- py39-dateutil: 2.8.2
- py39-fonttools: 4.47.0
- py39-fs2: 2.4.16
- py39-importlib-resources: 6.1.1
- py39-kiwisolver: 1.4.5,1
- py39-lxml: 4.9.3
- py39-matplotlib: 3.8.0
- py39-numpy: 1.25.0_4,1
- py39-olefile: 0.46
- py39-packaging: 23.2
- py39-pillow: 10.1.0
- py39-pluggy: 1.3.0
- py39-pyparsing: 3.1.1
- py39-pytz: 2023.3,1
- py39-reportlab: 3.6.13
- py39-setuptools: 63.1.0_1
- py39-six: 1.16.0
- py39-tkinter: 3.9.18_7
- py39-tornado: 6.3.3
- py39-unicodedata2: 15.1.0
- py39-zipp: 3.17.0
- py39-zopfli: 0.2.3
- python3: 3_3
- qhull: 8.0.2_2,1
- rdkit: 2023.09.3
- suitesparse-amd: 3.3.0
- suitesparse-camd: 3.3.0
- suitesparse-ccolamd: 3.3.0
- suitesparse-cholmod: 5.1.0
- suitesparse-colamd: 3.3.0
- suitesparse-config: 7.4.0
- suitesparse-umfpack: 6.3.0
- tcl86: 8.6.13
- tiff: 4.4.0_2
- tk86: 8.6.13
- webp: 1.3.2
- xorg-fonts-truetype: 7.7_1
- xorgproto: 2023.2
-
- Number of packages to be installed: 113
-
- The process will require 1 GiB more space.
- 235 MiB to be downloaded.
- [spring] [1/113] Fetching qhull-8.0.2_2,1.pkg: .......
- ... done
- [spring] [2/113] Fetching freetype2-2.13.2.pkg: .......... done
- [spring] [3/113] Fetching libglvnd-1.7.0.pkg: ......... done
- [spring] [4/113] Fetching py39-matplotlib-3.8.0.pkg:
- ......
- .... done
- [spring] [5/113] Fetching guile2-2.2.7_5.pkg: ...
- ....... done
- [spring] [6/113] Fetching py39-lxml-4.9.3.pkg: ...
- ....... done
- [spring] [7/113] Fetching lcms2-2.16.pkg: .........
- . done
- [spring] [8/113] Fetching suitesparse-cholmod-5.1.0.pkg: .......... done
- [spring] [9/113] Fetching libthai-0.1.29.pkg: ....... done
- [spring] [10/113] Fetching python3-3_3.pkg: .. done
- [spring] [11/113] Fetching boehm-gc-threaded-8.2.4.pkg: .......... done
- [spring] [12/113] Fetching openjpeg-2.5.0_1.pkg: ..
- ........ done
- [spring] [13/113] Fetching rdkit-2023.09.3.pkg:
- ..
- ..
- ..
- ..
- .. done
- [spring] [14/113] Fetching py39-pluggy-1.3.0.pkg: ....... done
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- [spring] [16/113] Fetching icu-74.2,1.pkg: ..
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- .. done
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- [spring] [18/113] Fetching giflib-5.2.1.pkg: ........ done
- [spring] [19/113] Fetching guile-aclocal-3.0.9_1.pkg: ... done
- [spring] [20/113] Fetching xorgproto-2023.2.pkg: .......... done
- [spring] [21/113] Fetching suitesparse-ccolamd-3.3.0.pkg: ...... done
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- [spring] [23/113] Fetching py39-reportlab-3.6.13.pkg: .......
- ... done
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- [spring] [26/113] Fetching coordgenlibs-3.0.2.pkg: ........
- .. done
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- .
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- .
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- . done
- [spring] [36/113] Fetching py39-appdirs-1.4.4.pkg: .. done
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- [spring] [39/113] Fetching py39-zopfli-0.2.3.pkg: .........
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- [spring] [40/113] Fetching glib-2.78.3,2.pkg: .
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- [spring] [42/113] Fetching font-misc-meltho-1.0.3_5.pkg: .......... done
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- .... done
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- ......... done
- [spring] [52/113] Fetching libdatrie-0.2.13_1.pkg: ..... done
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- ......... done
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- [spring] [80/113] Fetching encodings-1.0.5,1.pkg: .........
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- [spring] [82/113] Fetching nlopt-2.7.1_2.pkg: ......... done
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- ....... done
- [spring] [84/113] Fetching libfontenc-1.1.7.pkg: ... done
- [spring] [85/113] Fetching py39-unicodedata2-15.1.0.pkg: ........ done
- [spring] [86/113] Fetching libgcrypt-1.10.3.pkg: .......... done
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- ...... done
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- ......... done
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- ..... done
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- [spring] [106/113] Fetching m4-1.4.19,1.pkg: ........ done
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- [spring] [108/113] Fetching libSM-1.2.3_1,1.pkg: .... done
- [spring] [109/113] Fetching py39-certifi-2023.11.17.pkg: .......... done
- [spring] [110/113] Fetching py39-importlib-resources-6.1.1.pkg: ..... done
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- .....
- .... done
- [spring] [113/113] Fetching autoconf-switch-20220527.pkg: . done
- Checking integrity...
- done (0 conflicting)
- [spring] [1/113] Installing gmp-6.3.0...
- [spring] [1/113] Extracting gmp-6.3.0: .......... done
- [spring] [2/113] Installing mpfr-4.2.1,1...
- [spring] [2/113] Extracting mpfr-4.2.1,1: .......... done
- [spring] [3/113] Installing xorgproto-2023.2...
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- [spring] [4/113] Installing mpc-1.3.1_1...
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- [spring] [5/113] Installing binutils-2.40_4,1...
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- ....
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- [spring] [6/113] Installing libXau-1.0.9...
- [spring] [6/113] Extracting libXau-1.0.9: .......... done
- [spring] [7/113] Installing gcc12-12.2.0_7...
- [spring] [7/113] Extracting gcc12-12.2.0_7:
- .
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- . done
- [spring] [8/113] Installing libXdmcp-1.1.3...
- [spring] [8/113] Extracting libXdmcp-1.1.3: ......... done
- [spring] [9/113] Installing brotli-1.1.0,1...
- [spring] [9/113] Extracting brotli-1.1.0,1: .......... done
- [spring] [10/113] Installing openblas-0.3.25,2...
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- ==> Running trigger: gio-modules.ucl
- Generating GIO modules cache
- ==> Running trigger: fontconfig.ucl
- Running fc-cache to build fontconfig cache...
- ==> Running trigger: glib-schemas.ucl
- Compiling glib schemas
- No schema files found: doing nothing.
- =====
- Message from gcc12-12.2.0_7:
-
- --
- To ensure binaries built with this toolchain find appropriate versions
- of the necessary run-time libraries, you may want to link using
-
- -Wl,-rpath=/usr/local/lib/gcc12
-
- For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens
- transparently.
- =====
- Message from freetype2-2.13.2:
-
- --
- The 2.7.x series now uses the new subpixel hinting mode (V40 port's option) as
- the default, emulating a modern version of ClearType. This change inevitably
- leads to different rendering results, and you might change port's options to
- adapt it to your taste (or use the new "FREETYPE_PROPERTIES" environment
- variable).
-
- The environment variable "FREETYPE_PROPERTIES" can be used to control the
- driver properties. Example:
-
- FREETYPE_PROPERTIES=truetype:interpreter-version=35 \
- cff:no-stem-darkening=1 \
- autofitter:warping=1
-
- This allows to select, say, the subpixel hinting mode at runtime for a given
- application.
-
- If LONG_PCF_NAMES port's option was enabled, the PCF family names may include
- the foundry and information whether they contain wide characters. For example,
- "Sony Fixed" or "Misc Fixed Wide", instead of "Fixed". This can be disabled at
- run time with using pcf:no-long-family-names property, if needed. Example:
-
- FREETYPE_PROPERTIES=pcf:no-long-family-names=1
-
- How to recreate fontconfig cache with using such environment variable,
- if needed:
- # env FREETYPE_PROPERTIES=pcf:no-long-family-names=1 fc-cache -fsv
-
- The controllable properties are listed in the section "Controlling FreeType
- Modules" in the reference's table of contents
- (/usr/local/share/doc/freetype2/reference/index.html, if documentation was installed).
- =====
- Message from dejavu-2.37_3:
-
- --
- Make sure that the freetype module is loaded. If it is not, add the following
- line to the "Modules" section of your X Windows configuration file:
-
- Load "freetype"
-
- Add the following line to the "Files" section of X Windows configuration file:
-
- FontPath "/usr/local/share/fonts/dejavu/"
-
- Note: your X Windows configuration file is typically /etc/X11/XF86Config
- if you are using XFree86, and /etc/X11/xorg.conf if you are using X.Org.
- =====
- Message from boost-libs-1.83.0_1:
-
- --
- You have built the Boost library with thread support.
-
- Don't forget to add -pthread to your linker options when
- linking your code.
- =====
- Message from libthai-0.1.29:
-
- --
- ===> NOTICE:
-
- The libthai port currently does not have a maintainer. As a result, it is
- more likely to have unresolved issues, not be up-to-date, or even be removed in
- the future. To volunteer to maintain this port, please create an issue at:
-
- https://bugs.freebsd.org/bugzilla
-
- More information about port maintainership is available at:
-
- https://docs.freebsd.org/en/articles/contributing/#ports-contributing
- =====
- Message from py39-boost-libs-1.83.0:
-
- --
- You have built the Boost library with thread support.
-
- Don't forget to add -pthread to your linker options when
- linking your code.
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+ /usr/local/bin/pkg-config "--help" (CWD=/usr/home/opam/.opam/5.1.0/.opam-switch/build/conf-pkg-config.3)
- usage: pkgconf [OPTIONS] [LIBRARIES]
-
- basic options:
-
- --help this message
- --about print pkgconf version and license to stdout
- --version print supported pkg-config version to stdout
- --verbose print additional information
- --atleast-pkgconfig-version check whether or not pkgconf is compatible
- with a specified pkg-config version
- --errors-to-stdout print all errors on stdout instead of stderr
- --print-errors ensure all errors are printed
- --short-errors be less verbose about some errors
- --silence-errors explicitly be silent about errors
- --list-all list all known packages
- --list-package-names list all known package names
- --simulate simulate walking the calculated dependency graph
- --no-cache do not cache already seen packages when
- walking the dependency graph
- --log-file=filename write an audit log to a specified file
- --with-path=path adds a directory to the search path
- --define-prefix override the prefix variable with one that is guessed based on
- the location of the .pc file
- --dont-define-prefix do not override the prefix variable under any circumstances
- --prefix-variable=varname sets the name of the variable that pkgconf considers
- to be the package prefix
- --relocate=path relocates a path and exits (mostly for testsuite)
- --dont-relocate-paths disables path relocation support
-
- cross-compilation personality support:
-
- --personality=triplet|filename sets the personality to 'triplet' or a file named 'filename'
- --dump-personality dumps details concerning selected personality
-
- checking specific pkg-config database entries:
-
- --atleast-version require a specific version of a module
- --exact-version require an exact version of a module
- --max-version require a maximum version of a module
- --exists check whether or not a module exists
- --uninstalled check whether or not an uninstalled module will be used
- --no-uninstalled never use uninstalled modules when satisfying dependencies
- --no-provides do not use 'provides' rules to resolve dependencies
- --maximum-traverse-depth maximum allowed depth for dependency graph
- --static be more aggressive when computing dependency graph
- (for static linking)
- --shared use a simplified dependency graph (usually default)
- --pure optimize a static dependency graph as if it were a normal
- dependency graph
- --env-only look only for package entries in PKG_CONFIG_PATH
- --ignore-conflicts ignore 'conflicts' rules in modules
- --validate validate specific .pc files for correctness
-
- querying specific pkg-config database fields:
-
- --define-variable=varname=value define variable 'varname' as 'value'
- --variable=varname print specified variable entry to stdout
- --cflags print required CFLAGS to stdout
- --cflags-only-I print required include-dir CFLAGS to stdout
- --cflags-only-other print required non-include-dir CFLAGS to stdout
- --libs print required linker flags to stdout
- --libs-only-L print required LDPATH linker flags to stdout
- --libs-only-l print required LIBNAME linker flags to stdout
- --libs-only-other print required other linker flags to stdout
- --print-requires print required dependency frameworks to stdout
- --print-requires-private print required dependency frameworks for static
- linking to stdout
- --print-provides print provided dependencies to stdout
- --print-variables print all known variables in module to stdout
- --digraph print entire dependency graph in graphviz 'dot' format
- --keep-system-cflags keep -I/usr/include entries in cflags output
- --keep-system-libs keep -L/usr/lib entries in libs output
- --path show the exact filenames for any matching .pc files
- --modversion print the specified module's version to stdout
- --internal-cflags do not filter 'internal' cflags from output
- --license print the specified module's license to stdout if known
-
- filtering output:
-
- --msvc-syntax print translatable fragments in MSVC syntax
- --fragment-filter=types filter output fragments to the specified types
-
- report bugs to <https://github.com/pkgconf/pkgconf/issues/new>.
-> compiled conf-pkg-config.3
Processing 18/110: [bst.7.0.1: http] [cpm.12.2.0: http] [conf-libsvm-tools: bash] [conf-python-3: python3 test.py] [conf-rdkit: sh] [conf-which: which which]
-> installed conf-pkg-config.3
Processing 19/110: [bst.7.0.1: http] [cpm.12.2.0: http] [conf-libsvm-tools: bash] [conf-python-3: python3 test.py] [conf-rdkit: sh] [conf-which: which which]
Processing 20/110: [bst.7.0.1: http] [cpm.12.2.0: http] [conf-libsvm-tools: bash] [conf-nlopt: pkg-config nlopt] [conf-python-3: python3 test.py] [conf-rdkit: sh] [conf-which: which which]
+ /usr/bin/which "which" (CWD=/usr/home/opam/.opam/5.1.0/.opam-switch/build/conf-which.1)
- /usr/bin/which
-> compiled conf-which.1
Processing 20/110: [bst.7.0.1: http] [cpm.12.2.0: http] [conf-libsvm-tools: bash] [conf-nlopt: pkg-config nlopt] [conf-python-3: python3 test.py] [conf-rdkit: sh]
-> installed conf-which.1
Processing 21/110: [bst.7.0.1: http] [cpm.12.2.0: http] [conf-libsvm-tools: bash] [conf-nlopt: pkg-config nlopt] [conf-python-3: python3 test.py] [conf-rdkit: sh]
Processing 22/110: [bst.7.0.1: http] [cpm.12.2.0: http] [conf-autoconf: which autoconf] [conf-libsvm-tools: bash] [conf-nlopt: pkg-config nlopt] [conf-python-3: python3 test.py] [conf-rdkit: sh]
Processing 23/110: [bst.7.0.1: http] [cpm.12.2.0: http] [conf-autoconf: which autoconf] [conf-graphviz: which dot] [conf-libsvm-tools: bash] [conf-nlopt: pkg-config nlopt] [conf-python-3: python3 test.py] [conf-rdkit: sh]
+ /usr/local/bin/pkg-config "--exists" "nlopt" (CWD=/usr/home/opam/.opam/5.1.0/.opam-switch/build/conf-nlopt.1)
-> compiled conf-nlopt.1
Processing 23/110: [bst.7.0.1: http] [cpm.12.2.0: http] [conf-autoconf: which autoconf] [conf-graphviz: which dot] [conf-libsvm-tools: bash] [conf-python-3: python3 test.py] [conf-rdkit: sh]
-> installed conf-nlopt.1
Processing 24/110: [bst.7.0.1: http] [cpm.12.2.0: http] [conf-autoconf: which autoconf] [conf-graphviz: which dot] [conf-libsvm-tools: bash] [conf-python-3: python3 test.py] [conf-rdkit: sh]
+ /usr/bin/which "dot" (CWD=/usr/home/opam/.opam/5.1.0/.opam-switch/build/conf-graphviz.0.1)
- /usr/local/bin/dot
-> compiled conf-graphviz.0.1
Processing 24/110: [bst.7.0.1: http] [cpm.12.2.0: http] [conf-autoconf: which autoconf] [conf-libsvm-tools: bash] [conf-python-3: python3 test.py] [conf-rdkit: sh]
-> installed conf-graphviz.0.1
Processing 25/110: [bst.7.0.1: http] [cpm.12.2.0: http] [conf-autoconf: which autoconf] [conf-libsvm-tools: bash] [conf-python-3: python3 test.py] [conf-rdkit: sh]
+ /usr/bin/which "autoconf" (CWD=/usr/home/opam/.opam/5.1.0/.opam-switch/build/conf-autoconf.0.1)
- /usr/local/bin/autoconf
-> compiled conf-autoconf.0.1
Processing 25/110: [bst.7.0.1: http] [cpm.12.2.0: http] [conf-libsvm-tools: bash] [conf-python-3: python3 test.py] [conf-rdkit: sh]
-> installed conf-autoconf.0.1
Processing 26/110: [bst.7.0.1: http] [cpm.12.2.0: http] [conf-libsvm-tools: bash] [conf-python-3: python3 test.py] [conf-rdkit: sh]
+ /usr/local/bin/bash "-c" "command -v svm-train 2>&1 > /dev/null" (CWD=/usr/home/opam/.opam/5.1.0/.opam-switch/build/conf-libsvm-tools.1.0.0)
[ERROR] The compilation of conf-libsvm-tools.1.0.0 failed at "bash -c command -v svm-train 2>&1 > /dev/null".
Processing 26/110: [bst.7.0.1: http] [cpm.12.2.0: http] [conf-python-3: python3 test.py] [conf-rdkit: sh]
Processing 27/110: [bst.7.0.1: http] [cpm.12.2.0: http] [conf-python-3: python3 test.py] [conf-rdkit: sh]
-> retrieved batteries.3.7.2 (cached)
Processing 28/110: [bst.7.0.1: http] [cpm.12.2.0: http] [cpu.2.0.0: http] [conf-python-3: python3 test.py] [conf-rdkit: sh]
+ /bin/sh "-c" "c++ test.cpp -o test -I/usr/local/include -I/usr/local/include/rdkit -L/usr/local/lib -lRDKitRDGeneral -DSWIG" (CWD=/usr/home/opam/.opam/5.1.0/.opam-switch/build/conf-rdkit.1)
Processing 28/110: [bst.7.0.1: http] [cpm.12.2.0: http] [cpu.2.0.0: http] [conf-python-3: python3 test.py] [conf-rdkit: ./test]
+ /usr/local/bin/python3 "test.py" (CWD=/usr/home/opam/.opam/5.1.0/.opam-switch/build/conf-python-3.9.0.0)
- python-3 OK
-> compiled conf-python-3.9.0.0
Processing 28/110: [bst.7.0.1: http] [cpm.12.2.0: http] [cpu.2.0.0: http] [conf-rdkit: ./test]
-> installed conf-python-3.9.0.0
Processing 29/110: [bst.7.0.1: http] [cpm.12.2.0: http] [cpu.2.0.0: http] [conf-rdkit: ./test]
+ /usr/home/opam/.opam/5.1.0/.opam-switch/build/conf-rdkit.1/./test (CWD=/usr/home/opam/.opam/5.1.0/.opam-switch/build/conf-rdkit.1)
- 2023.09.3
-> compiled conf-rdkit.1
Processing 29/110: [bst.7.0.1: http] [cpm.12.2.0: http] [cpu.2.0.0: http]
-> installed conf-rdkit.1
Processing 30/110: [bst.7.0.1: http] [cpm.12.2.0: http] [cpu.2.0.0: http]
Processing 30/110: [bst.7.0.1: http] [cpu.2.0.0: http]
-> retrieved cpm.12.2.0 (https://github.com/UnixJunkie/cpmlib/archive/v12.2.0.tar.gz)
Processing 31/110: [bst.7.0.1: http] [cpu.2.0.0: http]
-> retrieved csexp.1.5.2 (cached)
Processing 32/110: [bst.7.0.1: http] [cpu.2.0.0: http] [dokeysto.4.0.1: http]
Processing 32/110: [cpu.2.0.0: http] [dokeysto.4.0.1: http]
-> retrieved bst.7.0.1 (https://github.com/UnixJunkie/bisec-tree/archive/v7.0.1.tar.gz)
Processing 33/110: [cpu.2.0.0: http] [dokeysto.4.0.1: http] [dolog.6.0.0: http]
Processing 33/110: [dokeysto.4.0.1: http] [dolog.6.0.0: http]
-> retrieved cpu.2.0.0 (https://github.com/UnixJunkie/cpu/archive/v2.0.0.tar.gz)
Processing 34/110: [dokeysto.4.0.1: http] [dolog.6.0.0: http]
Processing 34/110: [dokeysto.4.0.1: http]
-> retrieved dolog.6.0.0 (https://github.com/UnixJunkie/dolog/archive/v6.0.0.tar.gz)
Processing 35/110: [dokeysto.4.0.1: http] [extunix.0.4.1: http]
Processing 35/110: [extunix.0.4.1: http]
-> retrieved dokeysto.4.0.1 (https://github.com/UnixJunkie/dokeysto/archive/v4.0.1.tar.gz)
Processing 36/110: [extunix.0.4.1: http] [line_oriented.1.3.0: http]
Processing 36/110: [extunix.0.4.1: http]
-> retrieved line_oriented.1.3.0 (https://github.com/UnixJunkie/line-oriented/archive/v1.3.0.tar.gz)
Processing 37/110: [extunix.0.4.1: http] [minicli.5.0.2: http]
Processing 37/110: [minicli.5.0.2: http]
-> retrieved extunix.0.4.1 (https://github.com/ygrek/extunix/releases/download/v0.4.1/extunix-0.4.1.tbz)
Processing 38/110: [minicli.5.0.2: http] [molenc.16.23.0: http]
-> retrieved dune.3.13.1, dune-configurator.3.13.1 (cached)
Processing 39/110: [minicli.5.0.2: http] [molenc.16.23.0: http] [nlopt.0.7.0: http]
Processing 40/110: [minicli.5.0.2: http] [molenc.16.23.0: http] [nlopt.0.7.0: http] [dune: ocaml 7]
Processing 40/110: [minicli.5.0.2: http] [molenc.16.23.0: http] [dune: ocaml 7]
Processing 40/110: [minicli.5.0.2: http] [dune: ocaml 7]
-> retrieved nlopt.0.7.0 (https://github.com/mkur/nlopt-ocaml/archive/refs/tags/release-0.7.tar.gz)
Processing 41/110: [minicli.5.0.2: http] [dune: ocaml 7]
Processing 41/110: [dune: ocaml 7]
-> retrieved minicli.5.0.2 (https://github.com/UnixJunkie/minicli/archive/v5.0.2.tar.gz)
Processing 42/110: [dune: ocaml 7]
-> retrieved num.1.5 (cached)
Processing 43/110: [dune: ocaml 7]
Processing 44/110: [dune: ocaml 7] [num: gmake opam-modern]
-> retrieved ocaml-compiler-libs.v0.12.4 (cached)
Processing 45/110: [dune: ocaml 7] [num: gmake opam-modern]
-> retrieved molenc.16.23.0 (https://github.com/UnixJunkie/molenc/archive/refs/tags/v16.23.0.tar.gz)
Processing 46/110: [parany.14.0.1: http] [dune: ocaml 7] [num: gmake opam-modern]
-> retrieved ocamlfind.1.9.6 (cached)
Processing 47/110: [parany.14.0.1: http] [dune: ocaml 7] [num: gmake opam-modern]
[ocamlfind: patch] applying 0001-Harden-test-for-OCaml-5.patch
Processing 48/110: [parany.14.0.1: http] [dune: ocaml 7] [num: gmake opam-modern] [ocamlfind: patch]
-> retrieved ppx_derivers.1.2.1 (cached)
Processing 49/110: [parany.14.0.1: http] [dune: ocaml 7] [num: gmake opam-modern] [ocamlfind: patch]
Processing 49/110: [parany.14.0.1: http] [dune: ocaml 7] [num: gmake opam-modern] [ocamlfind: ./configure]
-> retrieved ocamlgraph.2.1.0 (cached)
Processing 50/110: [parany.14.0.1: http] [dune: ocaml 7] [num: gmake opam-modern] [ocamlfind: ./configure]
-> retrieved pyml.20231101 (cached)
Processing 51/110: [parany.14.0.1: http] [dune: ocaml 7] [num: gmake opam-modern] [ocamlfind: ./configure]
-> retrieved sexplib0.v0.16.0 (cached)
Processing 52/110: [parany.14.0.1: http] [dune: ocaml 7] [num: gmake opam-modern] [ocamlfind: ./configure]
-> retrieved stdcompat.19 (cached)
Processing 53/110: [parany.14.0.1: http] [dune: ocaml 7] [num: gmake opam-modern] [ocamlfind: ./configure]
-> retrieved ppxlib.0.31.0 (cached)
Processing 54/110: [parany.14.0.1: http] [svmwrap.5.1.1: http] [dune: ocaml 7] [num: gmake opam-modern] [ocamlfind: ./configure]
-> retrieved stdlib-shims.0.3.0 (cached)
Processing 55/110: [parany.14.0.1: http] [svmwrap.5.1.1: http] [vector3.1.0.0: http] [dune: ocaml 7] [num: gmake opam-modern] [ocamlfind: ./configure]
+ /usr/home/opam/.opam/5.1.0/.opam-switch/build/ocamlfind.1.9.6/./configure "-bindir" "/usr/home/opam/.opam/5.1.0/bin" "-sitelib" "/usr/home/opam/.opam/5.1.0/lib" "-mandir" "/usr/home/opam/.opam/5.1.0/man" "-config" "/usr/home/opam/.opam/5.1.0/lib/findlib.conf" "-no-custom" "-no-camlp4" (CWD=/usr/home/opam/.opam/5.1.0/.opam-switch/build/ocamlfind.1.9.6)
- Welcome to findlib version 1.9.6
- Configuring core...
- Checking for #remove_directory...
- Testing threading model...
- systhread_supported: true
- Testing DLLs...
- Testing whether ppxopt can be supported...
- Checking for ocamlc -opaque...
- Checking for ocamlopt -g...
- Configuring libraries...
- unix: found (in +unix)
- dynlink: found (in +dynlink)
- bigarray: not present (possible since 4.08)
- compiler-libs: found
- dbm: not present (normal since 4.00)
- graphics: not present (normal since 4.09)
- num: not present (normal since 4.06)
- ocamlbuild: not present (normal since 4.03)
- ocamldoc: found (in +ocamldoc)
- raw_spacetime: not present (normal since 4.12)
- threads: found (in +threads)
- str: found (in +str)
- labltk: not present (normal since 4.02)
- native dynlink: found
- camlp4: disabled
- bytes: found, installing fake library
- Configuration for bytes written to site-lib-src/bytes/META
- Detecting compiler arguments: (extractor built) ok
-
- About the OCAML core installation:
- Standard library: /usr/home/opam/.opam/5.1.0/lib/ocaml
- Binaries: /usr/home/opam/.opam/5.1.0/bin
- Manual pages: /usr/home/opam/.opam/5.1.0/man
- Multi-threading type: posix
- The directory of site-specific packages will be
- site-lib: /usr/home/opam/.opam/5.1.0/lib
- The configuration file is written to:
- findlib config file: /usr/home/opam/.opam/5.1.0/lib/findlib.conf
- Software will be installed:
- Libraries: in <site-lib>/findlib
- Binaries: /usr/home/opam/.opam/5.1.0/bin
- Manual pages: /usr/home/opam/.opam/5.1.0/man
- topfind script: /usr/home/opam/.opam/5.1.0/lib/ocaml
- Topfind ppxopt support: yes
- Toolbox: no
- Link custom runtime: no
- Need bytes compatibility: no
-
- Configuration has been written to Makefile.config
-
- You can now do 'make all', and optionally 'make opt', to build ocamlfind.
Processing 55/110: [parany.14.0.1: http] [svmwrap.5.1.1: http] [vector3.1.0.0: http] [dune: ocaml 7] [num: gmake opam-modern] [ocamlfind: gmake all]
Processing 55/110: [svmwrap.5.1.1: http] [vector3.1.0.0: http] [dune: ocaml 7] [num: gmake opam-modern] [ocamlfind: gmake all]
-> retrieved parany.14.0.1 (https://github.com/UnixJunkie/parany/archive/v14.0.1.tar.gz)
Processing 55/110: [vector3.1.0.0: http] [dune: ocaml 7] [num: gmake opam-modern] [ocamlfind: gmake all]
-> retrieved svmwrap.5.1.1 (https://github.com/UnixJunkie/svmwrap/archive/v5.1.1.tar.gz)
Processing 55/110: [dune: ocaml 7] [num: gmake opam-modern] [ocamlfind: gmake all]
-> retrieved vector3.1.0.0 (https://github.com/HappyCrow/vector3/archive/v1.0.0.tar.gz)
+ /usr/local/bin/gmake "all" (CWD=/usr/home/opam/.opam/5.1.0/.opam-switch/build/ocamlfind.1.9.6)
- for p in findlib; do ( cd src/$p; /usr/local/bin/gmake all ) || exit; done
- gmake[1]: Entering directory '/usr/home/opam/.opam/5.1.0/.opam-switch/build/ocamlfind.1.9.6/src/findlib'
- ocamllex fl_meta.mll
- 22 states, 392 transitions, table size 1700 bytes
- USE_CYGPATH="0"; \
- export USE_CYGPATH; \
- cat findlib_config.mlp | \
- ../../tools/patch '@CONFIGFILE@' '/usr/home/opam/.opam/5.1.0/lib/findlib.conf' | \
- ../../tools/patch '@STDLIB@' '/usr/home/opam/.opam/5.1.0/lib/ocaml' | \
- sed -e 's;@AUTOLINK@;true;g' \
- -e 's;@SYSTEM@;freebsd;g' \
- >findlib_config.ml
- if [ "true" = "true" ]; then \
- cp topfind.ml.in topfind.ml; \
- else \
- sed -e '/PPXOPT_BEGIN/,/PPXOPT_END/ d' topfind.ml.in \
- > topfind.ml ; \
- fi
- ocamldep *.ml *.mli >depend
- ocamlc -I +compiler-libs -opaque -I +unix -I +dynlink -g -c findlib_config.ml
- ocamlc -I +compiler-libs -opaque -I +unix -I +dynlink -g -c fl_split.ml
- ocamlc -I +compiler-libs -opaque -I +unix -I +dynlink -g -c fl_metatoken.ml
- ocamlc -I +compiler-libs -opaque -I +unix -I +dynlink -g -c fl_meta.ml
- ocamlc -I +compiler-libs -opaque -I +unix -I +dynlink -c fl_metascanner.mli
- ocamlc -I +compiler-libs -opaque -I +unix -I +dynlink -g -c fl_metascanner.ml
- ocamlc -I +compiler-libs -opaque -I +unix -I +dynlink -c fl_topo.mli
- ocamlc -I +compiler-libs -opaque -I +unix -I +dynlink -g -c fl_topo.ml
- ocamlc -I +compiler-libs -opaque -I +unix -I +dynlink -c fl_package_base.mli
- ocamlc -I +compiler-libs -opaque -I +unix -I +dynlink -g -c fl_package_base.ml
- File "fl_package_base.ml", line 304, characters 22-40:
- 304 | let pkg_ancestors = query_requirements predlist pkg in
- ^^^^^^^^^^^^^^^^^^
- Warning 6 [labels-omitted]: label preds was omitted in the application of this function.
-
- File "fl_package_base.ml", line 350, characters 18-36:
- 350 | let ancestors = query_requirements predlist package_name in
- ^^^^^^^^^^^^^^^^^^
- Warning 6 [labels-omitted]: label preds was omitted in the application of this function.
-
- File "fl_package_base.ml", line 375, characters 23-41:
- 375 | let pkg_ancestors = query_requirements predlist pkg in
- ^^^^^^^^^^^^^^^^^^
- Warning 6 [labels-omitted]: label preds was omitted in the application of this function.
-
- File "fl_package_base.ml", line 510, characters 16-35:
- 510 | ( let c = package_definitions search_path pkg.package_name in
- ^^^^^^^^^^^^^^^^^^^
- Warning 6 [labels-omitted]: label search_path was omitted in the application of this function.
- ocamlc -I +compiler-libs -opaque -I +unix -I +dynlink -c findlib.mli
- ocamlc -I +compiler-libs -opaque -I +unix -I +dynlink -g -c findlib.ml
- File "findlib.ml", line 390, characters 2-26:
- 390 | Fl_package_base.requires predlist pkg
- ^^^^^^^^^^^^^^^^^^^^^^^^
- Warning 6 [labels-omitted]: label preds was omitted in the application of this function.
-
- File "findlib.ml", line 396, characters 2-33:
- 396 | Fl_package_base.requires_deeply predlist pkglist
- ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
- Warning 6 [labels-omitted]: label preds was omitted in the application of this function.
- ocamlc -I +compiler-libs -opaque -I +unix -I +dynlink -g -c fl_args.ml
- ocamlc -I +compiler-libs -opaque -I +unix -I +dynlink -g -c fl_lint.ml
- ocamlc -I +compiler-libs -a -o findlib.cma findlib_config.cmo fl_split.cmo fl_metatoken.cmo fl_meta.cmo fl_metascanner.cmo fl_topo.cmo fl_package_base.cmo findlib.cmo fl_args.cmo fl_lint.cmo
- ocamlc -I +compiler-libs -opaque -I +unix -I +dynlink -g -c ocaml_args.ml
- ocamlc -I +compiler-libs -opaque -I +unix -I +dynlink -g -c frontend.ml
- File "frontend.ml", line 859, characters 10-39:
- 859 | Fl_package_base.package_users predicates1 packages1
- ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
- Warning 6 [labels-omitted]: label preds was omitted in the application of this function.
- ocamlc -I +compiler-libs -o ocamlfind -g findlib.cma unix.cma \
- -I +unix -I +dynlink ocaml_args.cmo frontend.cmo
- ocamlc -I +compiler-libs -opaque -I +unix -I +dynlink -c topfind.mli
- ocamlc -I +compiler-libs -opaque -I +unix -I +dynlink -g -c topfind.ml
- File "topfind.ml", line 128, characters 40-63:
- 128 | match Hashtbl.find Toploop.directive_table "ppx" with
- ^^^^^^^^^^^^^^^^^^^^^^^
- Alert deprecated: Toploop.directive_table
-
- File "topfind.ml", line 258, characters 4-27:
- 258 | Toploop.directive_table
- ^^^^^^^^^^^^^^^^^^^^^^^
- Alert deprecated: Toploop.directive_table
-
- File "topfind.ml", line 268, characters 4-27:
- 268 | Toploop.directive_table
- ^^^^^^^^^^^^^^^^^^^^^^^
- Alert deprecated: Toploop.directive_table
-
- File "topfind.ml", line 280, characters 4-27:
- 280 | Toploop.directive_table
- ^^^^^^^^^^^^^^^^^^^^^^^
- Alert deprecated: Toploop.directive_table
-
- File "topfind.ml", line 293, characters 4-27:
- 293 | Toploop.directive_table
- ^^^^^^^^^^^^^^^^^^^^^^^
- Alert deprecated: Toploop.directive_table
-
- File "topfind.ml", line 307, characters 4-27:
- 307 | Toploop.directive_table
- ^^^^^^^^^^^^^^^^^^^^^^^
- Alert deprecated: Toploop.directive_table
-
- File "topfind.ml", line 319, characters 4-27:
- 319 | Toploop.directive_table
- ^^^^^^^^^^^^^^^^^^^^^^^
- Alert deprecated: Toploop.directive_table
- ocamlc -I +compiler-libs -a -o findlib_top.cma topfind.cmo
- USE_CYGPATH="0"; \
- export USE_CYGPATH; \
- cat topfind_rd1.p | \
- ../../tools/patch '@SITELIB@' '/usr/home/opam/.opam/5.1.0/lib' \
- >topfind
- ocamlc -I +compiler-libs -opaque -I +unix -I +dynlink -c fl_dynload.mli
- ocamlc -I +compiler-libs -opaque -I +unix -I +dynlink -g -c fl_dynload.ml
- ocamlc -I +compiler-libs -a -o findlib_dynload.cma fl_dynload.cmo
- gmake[1]: Leaving directory '/usr/home/opam/.opam/5.1.0/.opam-switch/build/ocamlfind.1.9.6/src/findlib'
- /usr/local/bin/gmake all-config
- gmake[1]: Entering directory '/usr/home/opam/.opam/5.1.0/.opam-switch/build/ocamlfind.1.9.6'
- USE_CYGPATH="0"; \
- export USE_CYGPATH; \
- cat findlib.conf.in | \
- tools/patch '@SITELIB@' '/usr/home/opam/.opam/5.1.0/lib' | \
- tools/patch '@FINDLIB_PATH@' '/usr/home/opam/.opam/5.1.0/lib/ocaml:/usr/home/opam/.opam/5.1.0/lib' -p >findlib.conf
- if ./tools/cmd_from_same_dir ocamlc; then \
- echo 'ocamlc="ocamlc.opt"' >>findlib.conf; \
- fi
- if ./tools/cmd_from_same_dir ocamlopt; then \
- echo 'ocamlopt="ocamlopt.opt"' >>findlib.conf; \
- fi
- if ./tools/cmd_from_same_dir ocamldep; then \
- echo 'ocamldep="ocamldep.opt"' >>findlib.conf; \
- fi
- if ./tools/cmd_from_same_dir ocamldoc; then \
- echo 'ocamldoc="ocamldoc.opt"' >>findlib.conf; \
- fi
- gmake[1]: Leaving directory '/usr/home/opam/.opam/5.1.0/.opam-switch/build/ocamlfind.1.9.6'
Processing 55/110: [dune: ocaml 7] [num: gmake opam-modern] [ocamlfind: gmake opt]
+ /usr/local/bin/gmake "PROFILE=release" "opam-modern" (CWD=/usr/home/opam/.opam/5.1.0/.opam-switch/build/num.1.5)
- /usr/local/bin/gmake -C src all
- gmake[1]: Entering directory '/usr/home/opam/.opam/5.1.0/.opam-switch/build/num.1.5/src'
- ocamlc -ccopt -DBNG_ARCH_amd64 -c bng.c
- ocamlc -ccopt -DBNG_ARCH_amd64 -c nat_stubs.c
- ocamlmklib -oc nums bng.o nat_stubs.o
- ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c int_misc.mli
- ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c int_misc.ml
- ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c nat.mli
- ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c nat.ml
- ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c big_int.mli
- ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c big_int.ml
- ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c arith_flags.mli
- ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c arith_flags.ml
- ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c ratio.mli
- ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c ratio.ml
- ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c num.mli
- ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c num.ml
- ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c arith_status.mli
- ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c arith_status.ml
- ocamlmklib -o nums -oc nums -linkall int_misc.cmo nat.cmo big_int.cmo arith_flags.cmo ratio.cmo num.cmo arith_status.cmo
- cp ../toplevel/num_top_printers.mli ../toplevel/num_top.mli ../toplevel/num_top_printers.ml ../toplevel/num_top.ml .
- ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c num_top_printers.mli
- ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c num_top_printers.ml
- ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c num_top.mli
- ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c num_top.ml
- ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -a -o num_top.cma num_top_printers.cmo num_top.cmo
- echo 'version = "1.6~dev"' > META.top
- cat META.num-top.in >> META.top
- ocamlopt -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c int_misc.ml
- ocamlopt -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c nat.ml
- ocamlopt -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c big_int.ml
- ocamlopt -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c arith_flags.ml
- ocamlopt -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c ratio.ml
- ocamlopt -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c num.ml
- ocamlopt -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c arith_status.ml
- ocamlmklib -o nums -oc nums -linkall int_misc.cmx nat.cmx big_int.cmx arith_flags.cmx ratio.cmx num.cmx arith_status.cmx
- ocamlopt -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -I . -shared -o nums.cmxs nums.cmxa
- gmake[1]: Leaving directory '/usr/home/opam/.opam/5.1.0/.opam-switch/build/num.1.5/src'
- cp src/num-modern.install num.install
-> compiled num.1.5
Processing 55/110: [dune: ocaml 7] [ocamlfind: gmake opt]
-> installed num.1.5
Processing 56/110: [dune: ocaml 7] [ocamlfind: gmake opt]
+ /usr/local/bin/gmake "opt" (CWD=/usr/home/opam/.opam/5.1.0/.opam-switch/build/ocamlfind.1.9.6)
- for p in findlib; do ( cd src/$p; /usr/local/bin/gmake opt ) || exit; done
- gmake[1]: Entering directory '/usr/home/opam/.opam/5.1.0/.opam-switch/build/ocamlfind.1.9.6/src/findlib'
- ocamlopt -I +compiler-libs -g -opaque -I +unix -I +dynlink -c findlib_config.ml
- ocamlopt -I +compiler-libs -g -opaque -I +unix -I +dynlink -c fl_split.ml
- ocamlopt -I +compiler-libs -g -opaque -I +unix -I +dynlink -c fl_metatoken.ml
- ocamlopt -I +compiler-libs -g -opaque -I +unix -I +dynlink -c fl_meta.ml
- ocamlopt -I +compiler-libs -g -opaque -I +unix -I +dynlink -c fl_metascanner.ml
- ocamlopt -I +compiler-libs -g -opaque -I +unix -I +dynlink -c fl_topo.ml
- ocamlopt -I +compiler-libs -g -opaque -I +unix -I +dynlink -c fl_package_base.ml
- File "fl_package_base.ml", line 304, characters 22-40:
- 304 | let pkg_ancestors = query_requirements predlist pkg in
- ^^^^^^^^^^^^^^^^^^
- Warning 6 [labels-omitted]: label preds was omitted in the application of this function.
-
- File "fl_package_base.ml", line 350, characters 18-36:
- 350 | let ancestors = query_requirements predlist package_name in
- ^^^^^^^^^^^^^^^^^^
- Warning 6 [labels-omitted]: label preds was omitted in the application of this function.
-
- File "fl_package_base.ml", line 375, characters 23-41:
- 375 | let pkg_ancestors = query_requirements predlist pkg in
- ^^^^^^^^^^^^^^^^^^
- Warning 6 [labels-omitted]: label preds was omitted in the application of this function.
-
- File "fl_package_base.ml", line 510, characters 16-35:
- 510 | ( let c = package_definitions search_path pkg.package_name in
- ^^^^^^^^^^^^^^^^^^^
- Warning 6 [labels-omitted]: label search_path was omitted in the application of this function.
- ocamlopt -I +compiler-libs -g -opaque -I +unix -I +dynlink -c findlib.ml
- File "findlib.ml", line 390, characters 2-26:
- 390 | Fl_package_base.requires predlist pkg
- ^^^^^^^^^^^^^^^^^^^^^^^^
- Warning 6 [labels-omitted]: label preds was omitted in the application of this function.
-
- File "findlib.ml", line 396, characters 2-33:
- 396 | Fl_package_base.requires_deeply predlist pkglist
- ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
- Warning 6 [labels-omitted]: label preds was omitted in the application of this function.
- ocamlopt -I +compiler-libs -g -opaque -I +unix -I +dynlink -c fl_args.ml
- ocamlopt -I +compiler-libs -g -opaque -I +unix -I +dynlink -c fl_lint.ml
- ocamlopt -I +compiler-libs -g -a -o findlib.cmxa findlib_config.cmx fl_split.cmx fl_metatoken.cmx fl_meta.cmx fl_metascanner.cmx fl_topo.cmx fl_package_base.cmx findlib.cmx fl_args.cmx fl_lint.cmx
- if [ 1 -gt 0 ]; then \
- ocamlopt -I +compiler-libs -g -shared -o findlib.cmxs findlib_config.cmx fl_split.cmx fl_metatoken.cmx fl_meta.cmx fl_metascanner.cmx fl_topo.cmx fl_package_base.cmx findlib.cmx fl_args.cmx fl_lint.cmx; \
- fi
- ocamlopt -I +compiler-libs -g -opaque -I +unix -I +dynlink -c ocaml_args.ml
- ocamlopt -I +compiler-libs -g -opaque -I +unix -I +dynlink -c frontend.ml
- File "frontend.ml", line 859, characters 10-39:
- 859 | Fl_package_base.package_users predicates1 packages1
- ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
- Warning 6 [labels-omitted]: label preds was omitted in the application of this function.
- ocamlopt -I +compiler-libs -g -o ocamlfind_opt findlib.cmxa unix.cmxa \
- -I +unix -I +dynlink ocaml_args.cmx frontend.cmx
- ocamlopt -I +compiler-libs -g -opaque -I +unix -I +dynlink -c topfind.ml
- File "topfind.ml", line 128, characters 40-63:
- 128 | match Hashtbl.find Toploop.directive_table "ppx" with
- ^^^^^^^^^^^^^^^^^^^^^^^
- Alert deprecated: Toploop.directive_table
-
- File "topfind.ml", line 258, characters 4-27:
- 258 | Toploop.directive_table
- ^^^^^^^^^^^^^^^^^^^^^^^
- Alert deprecated: Toploop.directive_table
-
- File "topfind.ml", line 268, characters 4-27:
- 268 | Toploop.directive_table
- ^^^^^^^^^^^^^^^^^^^^^^^
- Alert deprecated: Toploop.directive_table
-
- File "topfind.ml", line 280, characters 4-27:
- 280 | Toploop.directive_table
- ^^^^^^^^^^^^^^^^^^^^^^^
- Alert deprecated: Toploop.directive_table
-
- File "topfind.ml", line 293, characters 4-27:
- 293 | Toploop.directive_table
- ^^^^^^^^^^^^^^^^^^^^^^^
- Alert deprecated: Toploop.directive_table
-
- File "topfind.ml", line 307, characters 4-27:
- 307 | Toploop.directive_table
- ^^^^^^^^^^^^^^^^^^^^^^^
- Alert deprecated: Toploop.directive_table
-
- File "topfind.ml", line 319, characters 4-27:
- 319 | Toploop.directive_table
- ^^^^^^^^^^^^^^^^^^^^^^^
- Alert deprecated: Toploop.directive_table
- ocamlopt -I +compiler-libs -g -a -o findlib_top.cmxa topfind.cmx
- if [ 1 -gt 0 ]; then \
- ocamlopt -I +compiler-libs -g -shared -o findlib_top.cmxs topfind.cmx; \
- fi
- ocamlopt -I +compiler-libs -g -opaque -I +unix -I +dynlink -c fl_dynload.ml
- ocamlopt -I +compiler-libs -g -a -o findlib_dynload.cmxa fl_dynload.cmx
- if [ 1 -gt 0 ]; then \
- ocamlopt -I +compiler-libs -g -shared -o findlib_dynload.cmxs fl_dynload.cmx; \
- fi
- gmake[1]: Leaving directory '/usr/home/opam/.opam/5.1.0/.opam-switch/build/ocamlfind.1.9.6/src/findlib'
-> compiled ocamlfind.1.9.6
Processing 56/110: [dune: ocaml 7]
Processing 57/110: [dune: ocaml 7] [ocamlfind: gmake install]
+ /usr/local/bin/gmake "install" (CWD=/usr/home/opam/.opam/5.1.0/.opam-switch/build/ocamlfind.1.9.6)
- if [ "0" -eq 1 ]; then \
- for x in camlp4 dbm graphics labltk num ocamlbuild; do \
- if [ -f "/usr/home/opam/.opam/5.1.0/lib/$x/META" ]; then \
- if ! grep -Fq '[distributed with Ocaml]' "//usr/home/opam/.opam/5.1.0/lib/$x/META"; then \
- rm -f site-lib-src/$x/META; \
- fi; \
- fi; \
- done; \
- test -f "site-lib-src/num/META" || rm -f "site-lib-src/num-top/META"; \
- fi
- echo 'SITELIB_META =' > Makefile.packages.in
- for x in `ls site-lib-src`; do test ! -f "site-lib-src/$x/META" || echo $x >> Makefile.packages.in; done
- tr '\n' ' ' < Makefile.packages.in > Makefile.packages
- rm Makefile.packages.in
- install -d "/usr/home/opam/.opam/5.1.0/bin"
- install -d "/usr/home/opam/.opam/5.1.0/man"
- /usr/local/bin/gmake install-config
- gmake[1]: Entering directory '/usr/home/opam/.opam/5.1.0/.opam-switch/build/ocamlfind.1.9.6'
- install -d "`dirname \"/usr/home/opam/.opam/5.1.0/lib/findlib.conf\"`"
- test -f "/usr/home/opam/.opam/5.1.0/lib/findlib.conf" || install -c findlib.conf "/usr/home/opam/.opam/5.1.0/lib/findlib.conf"
- gmake[1]: Leaving directory '/usr/home/opam/.opam/5.1.0/.opam-switch/build/ocamlfind.1.9.6'
- for p in findlib; do ( cd src/$p; /usr/local/bin/gmake install ); done
- gmake[1]: Entering directory '/usr/home/opam/.opam/5.1.0/.opam-switch/build/ocamlfind.1.9.6/src/findlib'
- install -d "/usr/home/opam/.opam/5.1.0/lib/findlib"
- install -d "/usr/home/opam/.opam/5.1.0/bin"
- test 1 -eq 0 || install -d "/usr/home/opam/.opam/5.1.0/lib/ocaml"
- test 1 -eq 0 || install -c topfind "/usr/home/opam/.opam/5.1.0/lib/ocaml/"
- files=` ../../tools/collect_files ../../Makefile.config \
- findlib.cmi findlib.mli findlib.cma findlib.cmxa findlib.a findlib.cmxs \
- findlib_config.cmi findlib_config.ml topfind.cmi topfind.mli \
- fl_args.cmi fl_lint.cmi fl_meta.cmi fl_split.cmi fl_topo.cmi ocaml_args.cmi \
- fl_package_base.mli fl_package_base.cmi fl_metascanner.mli fl_metascanner.cmi \
- fl_metatoken.cmi findlib_top.cma findlib_top.cmxa findlib_top.a findlib_top.cmxs \
- findlib_dynload.cma findlib_dynload.cmxa findlib_dynload.a findlib_dynload.cmxs fl_dynload.mli fl_dynload.cmi \
- META` && \
- install -c $files "/usr/home/opam/.opam/5.1.0/lib/findlib/"
- f="ocamlfind"; { test -f ocamlfind_opt && f="ocamlfind_opt"; }; \
- install -c $f "/usr/home/opam/.opam/5.1.0/bin/ocamlfind"
- # the following "if" block is only needed for 4.00beta2
- if [ 1 -eq 0 -a -f "/usr/home/opam/.opam/5.1.0/lib/ocaml/compiler-libs/topdirs.cmi" ]; then \
- cd "/usr/home/opam/.opam/5.1.0/lib/ocaml/compiler-libs/"; \
- install -c topdirs.cmi toploop.cmi "/usr/home/opam/.opam/5.1.0/lib/findlib/"; \
- fi
- gmake[1]: Leaving directory '/usr/home/opam/.opam/5.1.0/.opam-switch/build/ocamlfind.1.9.6/src/findlib'
- /usr/local/bin/gmake install-meta
- gmake[1]: Entering directory '/usr/home/opam/.opam/5.1.0/.opam-switch/build/ocamlfind.1.9.6'
- for x in bytes ; do install -d "/usr/home/opam/.opam/5.1.0/lib/$x"; install -c site-lib-src/$x/META "/usr/home/opam/.opam/5.1.0/lib/$x/META.tmp" && mv "/usr/home/opam/.opam/5.1.0/lib/$x/META.tmp" "/usr/home/opam/.opam/5.1.0/lib/$x/META"; done
- install -d "/usr/home/opam/.opam/5.1.0/lib/findlib"; install -c Makefile.packages "/usr/home/opam/.opam/5.1.0/lib/findlib/Makefile.packages"
- gmake[1]: Leaving directory '/usr/home/opam/.opam/5.1.0/.opam-switch/build/ocamlfind.1.9.6'
- test ! -f 'site-lib-src/num-top/META' || { cd src/findlib; /usr/local/bin/gmake install-num-top; }
- test ! -f 'site-lib-src/camlp4/META' || install -c tools/safe_camlp4 "/usr/home/opam/.opam/5.1.0/bin"
- /usr/local/bin/gmake install-doc
- gmake[1]: Entering directory '/usr/home/opam/.opam/5.1.0/.opam-switch/build/ocamlfind.1.9.6'
- install -d "/usr/home/opam/.opam/5.1.0/man/man1" "/usr/home/opam/.opam/5.1.0/man/man3" "/usr/home/opam/.opam/5.1.0/man/man5"
- install -c doc/ref-man/ocamlfind.1 "/usr/home/opam/.opam/5.1.0/man/man1"
- install -c doc/ref-man/META.5 doc/ref-man/site-lib.5 doc/ref-man/findlib.conf.5 "/usr/home/opam/.opam/5.1.0/man/man5"
- gmake[1]: Leaving directory '/usr/home/opam/.opam/5.1.0/.opam-switch/build/ocamlfind.1.9.6'
-> installed ocamlfind.1.9.6
Processing 57/110: [dune: ocaml 7]
Processing 58/110: [dune: ocaml 7]
-> installed base-bytes.base
Processing 59/110: [dune: ocaml 7]
+ /usr/home/opam/.opam/5.1.0/bin/ocaml "boot/bootstrap.ml" "-j" "7" (CWD=/usr/home/opam/.opam/5.1.0/.opam-switch/build/dune.3.13.1)
- ocamlc -output-complete-exe -w -24 -g -o .duneboot.exe -I boot -I +unix unix.cma boot/libs.ml boot/duneboot.ml
- ./.duneboot.exe -j 7
- cd _boot && /usr/home/opam/.opam/5.1.0/bin/ocamlopt.opt -c -g -no-alias-deps -w -49-6 -alert -unstable -I +unix -I +threads opamLocal.ml
- File "vendor/opam/src/repository/opamLocal.ml", lines 109-114, characters 46-34:
- Error (warning 8 [partial-match]): this pattern-matching is not exhaustive.
- Here is an example of a case that is not matched:
- Checksum_mismatch _
-
- File "vendor/opam/src/repository/opamLocal.ml", lines 170-189, characters 44-56:
- Error (warning 8 [partial-match]): this pattern-matching is not exhaustive.
- Here is an example of a case that is not matched:
- Checksum_mismatch _
-
- File "vendor/opam/src/repository/opamLocal.ml", lines 209-231, characters 8-44:
- Error (warning 8 [partial-match]): this pattern-matching is not exhaustive.
- Here is an example of a case that is not matched:
- Checksum_mismatch _
-
[ERROR] The compilation of dune.3.13.1 failed at "ocaml boot/bootstrap.ml -j 7".
#=== ERROR while compiling dune.3.13.1 ========================================#
# context 2.2.0~alpha4~dev | freebsd/x86_64 | ocaml-base-compiler.5.1.0 | file:///usr/home/opam/opam-repository
# path /usr/home/opam/.opam/5.1.0/.opam-switch/build/dune.3.13.1
# command /usr/home/opam/.opam/5.1.0/bin/ocaml boot/bootstrap.ml -j 7
# exit-code 2
# env-file /usr/home/opam/.opam/log/dune-58156-8609be.env
# output-file /usr/home/opam/.opam/log/dune-58156-8609be.out
### output ###
# [...]
# Checksum_mismatch _
#
# File "vendor/opam/src/repository/opamLocal.ml", lines 170-189, characters 44-56:
# Error (warning 8 [partial-match]): this pattern-matching is not exhaustive.
# Here is an example of a case that is not matched:
# Checksum_mismatch _
#
# File "vendor/opam/src/repository/opamLocal.ml", lines 209-231, characters 8-44:
# Error (warning 8 [partial-match]): this pattern-matching is not exhaustive.
# Here is an example of a case that is not matched:
# Checksum_mismatch _
#
#=== ERROR while compiling conf-libsvm-tools.1.0.0 ============================#
# context 2.2.0~alpha4~dev | freebsd/x86_64 | ocaml-base-compiler.5.1.0 | file:///usr/home/opam/opam-repository
# path /usr/home/opam/.opam/5.1.0/.opam-switch/build/conf-libsvm-tools.1.0.0
# command /usr/local/bin/bash -c command -v svm-train 2>&1 > /dev/null
# exit-code 1
# env-file /usr/home/opam/.opam/log/conf-libsvm-tools-58156-217ecd.env
# output-file /usr/home/opam/.opam/log/conf-libsvm-tools-58156-217ecd.out
<><> Error report <><><><><><><><><><><><><><><><><><><><><><><><><><><><><><><>
+- The following actions were aborted
| - install batteries 3.7.2
| - install bst 7.0.1
| - install camlp-streams 5.0.1
| - install cpm 12.2.0
| - install cpu 2.0.0
| - install csexp 1.5.2
| - install dokeysto 4.0.1
| - install dolog 6.0.0
| - install dune-configurator 3.13.1
| - install extunix 0.4.1
| - install line_oriented 1.3.0
| - install minicli 5.0.2
| - install molenc 16.23.0
| - install nlopt 0.7.0
| - install ocaml-compiler-libs v0.12.4
| - install ocamlgraph 2.1.0
| - install parany 14.0.1
| - install ppx_derivers 1.2.1
| - install ppxlib 0.31.0
| - install pyml 20231101
| - install sexplib0 v0.16.0
| - install stdcompat 19
| - install stdlib-shims 0.3.0
| - install svmwrap 5.1.1
| - install vector3 1.0.0
+-
+- The following actions failed
| - build conf-libsvm-tools 1.0.0
| - build dune 3.13.1
+-
+- The following changes have been performed (the rest was aborted)
| - install base-bytes base
| - install conf-autoconf 0.1
| - install conf-graphviz 0.1
| - install conf-nlopt 1
| - install conf-pkg-config 3
| - install conf-python-3 9.0.0
| - install conf-rdkit 1
| - install conf-which 1
| - install num 1.5
| - install ocamlfind 1.9.6
+-
The former state can be restored with:
/usr/local/bin/opam switch import "/usr/home/opam/.opam/5.1.0/.opam-switch/backup/state-20240207113100.export"
'opam install -vy svmwrap.5.1.1' failed.
jail: /usr/bin/su -l opam -c cd '/' && env OCAMLPARAM='warn-error=+8,_' OPAMCRITERIA='+removed' OPAMEXTERNALSOLVER='builtin-0install' OPAMUTF8='never' OPAMPRECISETRACKING='1' '/usr/bin/env' 'bash' '-c' '
opam remove -y "svmwrap.5.1.1"
opam install -vy "svmwrap.5.1.1"
res=$?
if [ $res = 31 ]; then
if opam show -f x-ci-accept-failures: "svmwrap.5.1.1" | grep -q '\''"freebsd"'\''; then
echo "This package failed and has been disabled for CI using the '\''x-ci-accept-failures'\'' field."
exit 69
fi
fi
exit $res
': failed
"jail" "-c" "name=obuilder_785_25259" "mount.fstab=/tmp/obuilder-jail-8641b4/fstab" "mount.devfs" "path=/obuilder/result/bd59178ed88766cb22aece43311e4b57d3a09c86afe0af946cb35e7396938be4/rootfs" "host=inherit" "ip6=inherit" "ip4=inherit" "command=/usr/bin/su" "-l" "opam" "-c" "cd '/' && env OCAMLPARAM='warn-error=+8,_' OPAMCRITERIA='+removed' OPAMEXTERNALSOLVER='builtin-0install' OPAMUTF8='never' OPAMPRECISETRACKING='1' '/usr/bin/env' 'bash' '-c' '
opam remove -y "svmwrap.5.1.1"
opam install -vy "svmwrap.5.1.1"
res=$?
if [ $res = 31 ]; then
if opam show -f x-ci-accept-failures: "svmwrap.5.1.1" | grep -q '\''"freebsd"'\''; then
echo "This package failed and has been disabled for CI using the '\''x-ci-accept-failures'\'' field."
exit 69
fi
fi
exit $res
'" failed with exit status 1
Failed: Build failed
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