Building on summer
(from freebsd-ocaml-5.0)
2023-10-31 22:01.26 ---> using "b0ee167c73857b60ecf6c06eff6bbe96857a02ac84fefd2b9807cb2eea16bf97" from cache
/: (user (uid 1000) (gid 1000))
/: (env OPAMPRECISETRACKING 1)
/: (env OPAMUTF8 never)
/: (env OPAMEXTERNALSOLVER builtin-0install)
/: (env OPAMCRITERIA +removed)
/: (run (shell "sudo ln -f /usr/local/bin/opam-2.1 /usr/local/bin/opam"))
2023-10-31 22:01.26 ---> using "58da31f76f3dd28576bb2b11a05c1473a2cbc0bc8e959f83414ab7001888e94f" from cache
/: (run (network host)
(shell "rm -rf ~/opam-repository && git clone -q 'https://github.com/ocaml/opam-repository' ~/opam-repository && git -C ~/opam-repository checkout -q 7b4cedddee88c79d6bdb00eccf7b36a7b617b211"))
2023-10-31 22:01.27 ---> using "ceda9c602c42ecee62840706a0356388ac8fe9b4284a02972fb121a316518aa6" from cache
/: (run (shell "rm -rf ~/.opam && opam init -ya --bare ~/opam-repository"))
No configuration file found, using built-in defaults.
Checking for available remotes: rsync and local, git.
- you won't be able to use mercurial repositories unless you install the hg command on your system.
- you won't be able to use darcs repositories unless you install the darcs command on your system.
<><> Fetching repository information ><><><><><><><><><><><><><><><><><><><><><>
[default] Initialised
User configuration:
/usr/home/opam/.profile is already up-to-date.
[NOTE] Make sure that /usr/home/opam/.profile is well sourced in your ~/.bashrc.
2023-10-31 22:01.27 ---> using "3d69dd19638d580f9a84afa315c8a62fa2810666d83257cb65ea0af54a8f6211" from cache
/: (run (cache (opam-archives (target /usr/home/opam/.opam/download-cache)))
(network host)
(shell "opam switch create --repositories=default '5.1.0' 'ocaml-base-compiler.5.1.0'"))
<><> Installing new switch packages <><><><><><><><><><><><><><><><><><><><><><>
Switch invariant: ["ocaml-base-compiler" {= "5.1.0"}]
<><> Processing actions <><><><><><><><><><><><><><><><><><><><><><><><><><><><>
-> installed base-bigarray.base
-> installed base-threads.base
-> installed base-unix.base
-> installed ocaml-options-vanilla.1
-> retrieved ocaml-base-compiler.5.1.0 (https://github.com/ocaml/ocaml/archive/5.1.0.tar.gz)
-> installed ocaml-base-compiler.5.1.0
-> installed ocaml-config.3
-> installed ocaml.5.1.0
-> installed base-domains.base
-> installed base-nnp.base
Done.
# Run eval $(opam env --switch=5.1.0) to update the current shell environment
2023-10-31 22:01.27 ---> using "4d14f892c8031ddfa16535e34e750068d1ecfde9d7023af826fa837a9a24e19b" from cache
/: (run (network host)
(shell "opam update --depexts"))
[WARNING] Unknown update command for bsd, skipping system update
2023-10-31 22:01.27 ---> using "5ae8e2574f1a4212f30d2d30a11aaa2f3fb04d584b1c4315437c02c59acafd50" from cache
/: (run (cache (opam-archives (target /usr/home/opam/.opam/download-cache)))
(network host)
(shell "\
\nopam remove -y \"conf-rdkit.1\"\
\nopam install -vy \"conf-rdkit.1\"\
\nres=$?\
\nif [ $res = 31 ]; then\
\n if opam show -f x-ci-accept-failures: \"conf-rdkit.1\" | grep -q '\"freebsd\"'; then\
\n echo \"This package failed and has been disabled for CI using the 'x-ci-accept-failures' field.\"\
\n exit 69\
\n fi\
\nfi\
\n\
\n\
\nexit $res\
\n"))
[NOTE] conf-rdkit.1 is not installed.
Nothing to do.
The following actions will be performed:
- install conf-rdkit 1
The following system packages will first need to be installed:
rdkit
<><> Handling external dependencies <><><><><><><><><><><><><><><><><><><><><><>
Let opam run your package manager to install the required system packages?
(answer 'n' for other options) [Y/n] y
+ /usr/local/bin/sudo "pkg" "install" "-y" "rdkit"
- Updating FreeBSD repository catalogue...
- [summer] Fetching packagesite.pkg: .......... done
- Processing entries:
- ...
- ...
- ...
- . done
- FreeBSD repository update completed. 34058 packages processed.
- All repositories are up to date.
- New version of pkg detected; it needs to be installed first.
- The following 1 package(s) will be affected (of 0 checked):
-
- Installed packages to be UPGRADED:
- pkg: 1.19.2 -> 1.20.8
-
- Number of packages to be upgraded: 1
-
- The process will require 1 MiB more space.
- 9 MiB to be downloaded.
- [summer] [1/1] Fetching pkg-1.20.8.pkg: .......... done
- Checking integrity... done (0 conflicting)
- [summer] [1/1] Upgrading pkg from 1.19.2 to 1.20.8...
- [summer] [1/1] Extracting pkg-1.20.8: ..
- .......
- . done
- Updating FreeBSD repository catalogue...
- FreeBSD repository is up to date.
- All repositories are up to date.
- The following 83 package(s) will be affected (of 0 checked):
-
- New packages to be INSTALLED:
- adobe-cmaps: 20051217_4
- binutils: 2.40_4,1
- boost-libs: 1.83.0
- brotli: 1.1.0,1
- coordgenlibs: 3.0.2
- fontconfig: 2.14.2,1
- freetype2: 2.13.1
- fribidi: 1.0.13
- gcc12: 12.2.0_6
- giflib: 5.2.1
- glib: 2.78.1,2
- gmp: 6.3.0
- graphite2: 1.3.14
- harfbuzz: 8.2.2
- icu: 73.2,1
- jbigkit: 2.1_1
- jpeg-turbo: 3.0.0
- lcms2: 2.15_2
- libX11: 1.8.7,1
- libXScrnSaver: 1.2.4
- libXau: 1.0.9
- libXdmcp: 1.1.3
- libXext: 1.3.4,1
- libXft: 2.3.7
- libXrender: 0.9.10_2
- libdeflate: 1.19
- libfontenc: 1.1.7
- libgcrypt: 1.10.2
- libgpg-error: 1.47
- libimagequant: 4.2.1
- libraqm: 0.10.1
- libxcb: 1.15_1
- libxml2: 2.10.4_1
- libxslt: 1.1.37
- maeparser: 1.3.1_2
- mkfontscale: 1.2.1
- mpc: 1.3.1_1
- mpfr: 4.2.1,1
- openblas: 0.3.20,2
- openjpeg: 2.5.0_1
- png: 1.6.40
- py39-appdirs: 1.4.4
- py39-boost-libs: 1.83.0
- py39-brotli: 1.1.0
- py39-certifi: 2023.7.22
- py39-contourpy: 1.1.1
- py39-cycler: 0.12.0
- py39-dateutil: 2.8.2
- py39-fonttools: 4.43.0
- py39-fs2: 2.4.16
- py39-importlib-resources: 6.1.0
- py39-kiwisolver: 1.4.4_1,1
- py39-lxml: 4.9.3
- py39-matplotlib: 3.7.1_3
- py39-numpy: 1.25.0_1,1
- py39-olefile: 0.46
- py39-packaging: 23.1
- py39-pillow: 10.0.1
- py39-pluggy: 1.3.0
- py39-pyparsing: 3.1.1
- py39-pytz: 2023.3,1
- py39-reportlab: 3.6.13
- py39-setuptools: 63.1.0_1
- py39-six: 1.16.0
- py39-tkinter: 3.9.18_7
- py39-tornado: 6.3.3
- py39-unicodedata2: 15.1.0
- py39-zipp: 3.17.0
- py39-zopfli: 0.2.3
- qhull: 8.0.2_2,1
- rdkit: 2023.03.3_1
- suitesparse-amd: 3.2.0
- suitesparse-camd: 3.2.0
- suitesparse-ccolamd: 3.2.0
- suitesparse-cholmod: 4.2.0
- suitesparse-colamd: 3.2.0
- suitesparse-config: 7.2.0
- suitesparse-umfpack: 6.2.0
- tcl86: 8.6.13
- tiff: 4.4.0_2
- tk86: 8.6.13
- webp: 1.3.2
- xorgproto: 2023.2
-
- Number of packages to be installed: 83
-
- The process will require 1 GiB more space.
- 214 MiB to be downloaded.
- [summer] [1/83] Fetching png-1.6.40.pkg: .......... done
- [summer] [2/83] Fetching qhull-8.0.2_2,1.pkg: .......... done
- [summer] [3/83] Fetching libxcb-1.15_1.pkg: .......... done
- [summer] [4/83] Fetching libraqm-0.10.1.pkg: .... done
- [summer] [5/83] Fetching freetype2-2.13.1.pkg: .......... done
- [summer] [6/83] Fetching jpeg-turbo-3.0.0.pkg: .......... done
- [summer] [7/83] Fetching py39-kiwisolver-1.4.4_1,1.pkg: ........ done
- [summer] [8/83] Fetching suitesparse-camd-3.2.0.pkg: .......... done
- [summer] [9/83] Fetching py39-matplotlib-3.7.1_3.pkg: .......... done
- [summer] [10/83] Fetching libxslt-1.1.37.pkg: .......... done
- [summer] [11/83] Fetching boost-libs-1.83.0.pkg: .......... done
- [summer] [12/83] Fetching py39-zipp-3.17.0.pkg: ... done
- [summer] [13/83] Fetching py39-lxml-4.9.3.pkg: .......... done
- [summer] [14/83] Fetching lcms2-2.15_2.pkg: .......... done
- [summer] [15/83] Fetching suitesparse-cholmod-4.2.0.pkg: .......... done
- [summer] [16/83] Fetching py39-olefile-0.46.pkg: ..... done
- [summer] [17/83] Fetching mkfontscale-1.2.1.pkg: ... done
- [summer] [18/83] Fetching py39-numpy-1.25.0_1,1.pkg: ..
- .....
- ... done
- [summer] [19/83] Fetching libdeflate-1.19.pkg: .......... done
- [summer] [20/83] Fetching fribidi-1.0.13.pkg: ........ done
- [summer] [21/83] Fetching openjpeg-2.5.0_1.pkg: .......... done
- [summer] [22/83] Fetching maeparser-1.3.1_2.pkg: ........ done
- [summer] [23/83] Fetching py39-pillow-10.0.1.pkg: .......... done
- [summer] [24/83] Fetching py39-fs2-2.4.16.pkg: .......... done
- [summer] [25/83] Fetching rdkit-2023.03.3_1.pkg: .
- ......
- ... done
- [summer] [26/83] Fetching py39-pluggy-1.3.0.pkg: ...... done
- [summer] [27/83] Fetching libxml2-2.10.4_1.pkg: ..
- ........ done
- [summer] [28/83] Fetching py39-cycler-0.12.0.pkg: .. done
- [summer] [29/83] Fetching icu-73.2,1.pkg: .......... done
- [summer] [30/83] Fetching libXScrnSaver-1.2.4.pkg: ... done
- [summer] [31/83] Fetching libimagequant-4.2.1.pkg: .......... done
- [summer] [32/83] Fetching libX11-1.8.7,1.pkg: .......... done
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- [summer] [34/83] Fetching libXrender-0.9.10_2.pkg: ....... done
- [summer] [35/83] Fetching suitesparse-umfpack-6.2.0.pkg: .......... done
- [summer] [36/83] Fetching xorgproto-2023.2.pkg: .......... done
- [summer] [37/83] Fetching suitesparse-ccolamd-3.2.0.pkg: .... done
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- [summer] [39/83] Fetching libXft-2.3.7.pkg: ....... done
- [summer] [40/83] Fetching webp-1.3.2.pkg: .......... done
- [summer] [41/83] Fetching py39-reportlab-3.6.13.pkg: .......... done
- [summer] [42/83] Fetching py39-pyparsing-3.1.1.pkg: .......... done
- [summer] [43/83] Fetching graphite2-1.3.14.pkg: ......... done
- [summer] [44/83] Fetching coordgenlibs-3.0.2.pkg: .......... done
- [summer] [45/83] Fetching harfbuzz-8.2.2.pkg: .......... done
- [summer] [46/83] Fetching suitesparse-amd-3.2.0.pkg: .......... done
- [summer] [47/83] Fetching py39-fonttools-4.43.0.pkg: .......... done
- [summer] [48/83] Fetching adobe-cmaps-20051217_4.pkg: .......... done
- [summer] [49/83] Fetching libfontenc-1.1.7.pkg: .. done
- [summer] [50/83] Fetching py39-tornado-6.3.3.pkg: .......... done
- [summer] [51/83] Fetching py39-contourpy-1.1.1.pkg: .......... done
- [summer] [52/83] Fetching py39-unicodedata2-15.1.0.pkg: .......... done
- [summer] [53/83] Fetching libgcrypt-1.10.2.pkg: .......... done
- [summer] [54/83] Fetching tk86-8.6.13.pkg: .......... done
- [summer] [55/83] Fetching brotli-1.1.0,1.pkg: .......... done
- [summer] [56/83] Fetching libgpg-error-1.47.pkg: .......... done
- [summer] [57/83] Fetching py39-packaging-23.1.pkg: ....... done
- [summer] [58/83] Fetching gmp-6.3.0.pkg: .......... done
- [summer] [59/83] Fetching py39-dateutil-2.8.2.pkg: .......... done
- [summer] [60/83] Fetching mpfr-4.2.1,1.pkg: .......... done
- [summer] [61/83] Fetching suitesparse-config-7.2.0.pkg: ..... done
- [summer] [62/83] Fetching libXext-1.3.4,1.pkg: ......... done
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- [summer] [65/83] Fetching py39-tkinter-3.9.18_7.pkg: ... done
- [summer] [66/83] Fetching py39-setuptools-63.1.0_1.pkg: .......... done
- [summer] [67/83] Fetching py39-pytz-2023.3,1.pkg: .......... done
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- [summer] [69/83] Fetching gcc12-12.2.0_6.pkg: ..
- ...
- ...
- .. done
- [summer] [70/83] Fetching py39-appdirs-1.4.4.pkg: .. done
- [summer] [71/83] Fetching py39-boost-libs-1.83.0.pkg: .......... done
- [summer] [72/83] Fetching fontconfig-2.14.2,1.pkg: .......... done
- [summer] [73/83] Fetching py39-zopfli-0.2.3.pkg: .......... done
- [summer] [74/83] Fetching mpc-1.3.1_1.pkg: .......... done
- [summer] [75/83] Fetching py39-certifi-2023.7.22.pkg: .......... done
- [summer] [76/83] Fetching glib-2.78.1,2.pkg: .......... done
- [summer] [77/83] Fetching jbigkit-2.1_1.pkg: ....... done
- [summer] [78/83] Fetching py39-importlib-resources-6.1.0.pkg: ..... done
- [summer] [79/83] Fetching binutils-2.40_4,1.pkg: .......
- ... done
- [summer] [80/83] Fetching libXdmcp-1.1.3.pkg: ... done
- [summer] [81/83] Fetching tiff-4.4.0_2.pkg: .......... done
- [summer] [82/83] Fetching tcl86-8.6.13.pkg: .......... done
- [summer] [83/83] Fetching openblas-0.3.20,2.pkg: .......... done
- Checking integrity...
- done (0 conflicting)
- [summer] [1/83] Installing gmp-6.3.0...
- [summer] [1/83] Extracting gmp-6.3.0: .......... done
- [summer] [2/83] Installing mpfr-4.2.1,1...
- [summer] [2/83] Extracting mpfr-4.2.1,1: .......... done
- [summer] [3/83] Installing xorgproto-2023.2...
- [summer] [3/83] Extracting xorgproto-2023.2: .......... done
- [summer] [4/83] Installing mpc-1.3.1_1...
- [summer] [4/83] Extracting mpc-1.3.1_1: ......... done
- [summer] [5/83] Installing binutils-2.40_4,1...
- [summer] [5/83] Extracting binutils-2.40_4,1:
- .......... done
- [summer] [6/83] Installing libXau-1.0.9...
- [summer] [6/83] Extracting libXau-1.0.9: .......... done
- [summer] [7/83] Installing gcc12-12.2.0_6...
- [summer] [7/83] Extracting gcc12-12.2.0_6:
- .....
- ....
- . done
- [summer] [8/83] Installing libXdmcp-1.1.3...
- [summer] [8/83] Extracting libXdmcp-1.1.3: ......... done
- [summer] [9/83] Installing png-1.6.40...
- [summer] [9/83] Extracting png-1.6.40: .......... done
- [summer] [10/83] Installing libxcb-1.15_1...
- [summer] [10/83] Extracting libxcb-1.15_1: .......... done
- [summer] [11/83] Installing brotli-1.1.0,1...
- [summer] [11/83] Extracting brotli-1.1.0,1: .......... done
- [summer] [12/83] Installing openblas-0.3.20,2...
- [summer] [12/83] Extracting openblas-0.3.20,2: .......
- .
- .. done
- [summer] [13/83] Installing freetype2-2.13.1...
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- [summer] [14/83] Installing libX11-1.8.7,1...
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- [summer] [15/83] Installing suitesparse-config-7.2.0...
- [summer] [15/83] Extracting suitesparse-config-7.2.0: .......... done
- [summer] [16/83] Installing jpeg-turbo-3.0.0...
- [summer] [16/83] Extracting jpeg-turbo-3.0.0: .......... done
- [summer] [17/83] Installing suitesparse-camd-3.2.0...
- [summer] [17/83] Extracting suitesparse-camd-3.2.0: .......... done
- [summer] [18/83] Installing libdeflate-1.19...
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- [summer] [21/83] Installing suitesparse-ccolamd-3.2.0...
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- [summer] [23/83] Installing libgpg-error-1.47...
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- [summer] [25/83] Installing suitesparse-colamd-3.2.0...
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- [summer] [27/83] Installing jbigkit-2.1_1...
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- [summer] [28/83] Installing suitesparse-cholmod-4.2.0...
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- [summer] [30/83] Installing libXft-2.3.7...
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- [summer] [32/83] Installing libgcrypt-1.10.2...
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- ..
- ..
- ...
- . done
- ==> Running trigger: glib-schemas.ucl
- Compiling glib schemas
- No schema files found: doing nothing.
- ==> Running trigger: gio-modules.ucl
- Generating GIO modules cache
- ==> Running trigger: fontconfig.ucl
- Running fc-cache to build fontconfig cache...
- =====
- Message from gcc12-12.2.0_6:
-
- --
- To ensure binaries built with this toolchain find appropriate versions
- of the necessary run-time libraries, you may want to link using
-
- -Wl,-rpath=/usr/local/lib/gcc12
-
- For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens
- transparently.
- =====
- Message from freetype2-2.13.1:
-
- --
- The 2.7.x series now uses the new subpixel hinting mode (V40 port's option) as
- the default, emulating a modern version of ClearType. This change inevitably
- leads to different rendering results, and you might change port's options to
- adapt it to your taste (or use the new "FREETYPE_PROPERTIES" environment
- variable).
-
- The environment variable "FREETYPE_PROPERTIES" can be used to control the
- driver properties. Example:
-
- FREETYPE_PROPERTIES=truetype:interpreter-version=35 \
- cff:no-stem-darkening=1 \
- autofitter:warping=1
-
- This allows to select, say, the subpixel hinting mode at runtime for a given
- application.
-
- If LONG_PCF_NAMES port's option was enabled, the PCF family names may include
- the foundry and information whether they contain wide characters. For example,
- "Sony Fixed" or "Misc Fixed Wide", instead of "Fixed". This can be disabled at
- run time with using pcf:no-long-family-names property, if needed. Example:
-
- FREETYPE_PROPERTIES=pcf:no-long-family-names=1
-
- How to recreate fontconfig cache with using such environment variable,
- if needed:
- # env FREETYPE_PROPERTIES=pcf:no-long-family-names=1 fc-cache -fsv
-
- The controllable properties are listed in the section "Controlling FreeType
- Modules" in the reference's table of contents
- (/usr/local/share/doc/freetype2/reference/index.html, if documentation was installed).
- =====
- Message from boost-libs-1.83.0:
-
- --
- You have built the Boost library with thread support.
-
- Don't forget to add -pthread to your linker options when
- linking your code.
- =====
- Message from py39-boost-libs-1.83.0:
-
- --
- You have built the Boost library with thread support.
-
- Don't forget to add -pthread to your linker options when
- linking your code.
<><> Processing actions <><><><><><><><><><><><><><><><><><><><><><><><><><><><>
Processing 2/3: [conf-rdkit: sh]
+ /bin/sh "-c" "c++ test.cpp -o test -I/usr/local/include -I/usr/local/include/rdkit -L/usr/local/lib -lRDKitRDGeneral -DSWIG" (CWD=/usr/home/opam/.opam/5.1.0/.opam-switch/build/conf-rdkit.1)
Processing 2/3: [conf-rdkit: ./test]
+ /usr/home/opam/.opam/5.1.0/.opam-switch/build/conf-rdkit.1/./test (CWD=/usr/home/opam/.opam/5.1.0/.opam-switch/build/conf-rdkit.1)
- 2023.03.3
-> compiled conf-rdkit.1
-> installed conf-rdkit.1
Done.
2023-10-31 22:03.57 ---> saved as "298cccb4ee0ce057780dd81a4b1f9423ded0aed80216e43a6599c38befeb4126"
Job succeeded
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